| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0393 |
|---|
| Symbol | |
|---|
| ID | 4422277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | + |
|---|
| Start bp | 349499 |
|---|
| End bp | 352357 |
|---|
| Gene Length | 2859 bp |
|---|
| Protein Length | 952 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639674104 |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_817888 |
|---|
| Protein GI | 116617517 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG ATCATATCGA AATACGCGGT GCTCGCGCTC ATAATTTAAA AAATATTGAT
GTAAATATTC CTAAAAATCA ACTCACAGTC GTTACTGGTC TATCTGGATC AGGTAAATCA
TCATTAGCTT TTGATACCCT ATACGCAGAG GGGCAAAGGC GCTACGTGGA AAGTTTAAGT
TCTTATGCAC GCCAATTTTT AGGTCAAATG GACAAACCAG ATGTCGATTC TATTGATGGT
TTATCACCTG CTATTTCTAT CGACCAAAAA ACAACATCTA ATAATCCACG CTCAACCGTT
GGTACAGTGA CTGAAATCAA TGATTACTTC CGTTTACTAT ACGCACGTGT TGGGCGACCG
GATGATCCAA AAGATGGTAC AAAAATTATG TATACAATCG ATCAAATGGT TGAATATACA
TTGAATAACC TGCCTGAGGG TACAAGATTA CAAGTATTTG CACCAATCAT TAGAGGAAAA
CGTGGATCGC ATGAAACAGC ATTTGACCAT ATGCGCAAAC AGGGATATAT TCGAGCTCGT
GTAGATGGAG ATATTATTGA GATTGATTCA CAGCAGTTGA GTCTTAATAA AAACAAGCCT
CACGACATTG ACGTTATGAT CGATCGAATT GTTTTACGTG GCAATTCTCG GTCACGTCTA
TTTGACTCGA TTGAAGCAGC TGTTCGTTTG AATGACGGCC AAGTTGAACT TGATGTGGTA
ACTCGTGATG ATGAAAATCC AGTTGCACCA TTAAAGTTTT CTGACCACTA TCTTGGAGAG
TTGAAGGATT TTCGTGCAGG GCGATTAGAA CCGCGCTTGT TCAGTTTCAA TGCACCATTA
GGAGCTTGTG AGTTTTGTCA AGGTTTGGGT GTCACGCGCG AAGTGGATAT TGATTTAGTA
ATTCCGGACG ATGCGAAAAC CTTGAATGAG GGAGCTATTC TGCCATGGAA TCCAATATCA
TCCAATTATT ATCCGGAAAT GTTGCGTCAA TTTGCTGAGC AATTTGCTAT TGACATGGAC
ACACCATTTA ATAAACTTCC TAAAAAACAA CAAGATTTAA TTCTGAATGG TTCTGATGAA
AAGGATTTTC ACTTCCATTA TAAAAATGAT TTTGGCGGGG TTCGTGATGT TGATATCCCC
TTTGAGGGAG TAATAAATAA CATTGCTCGC CGTTTCACGG AAACAAATTC AGATTTCACG
CGCGAGCAAA TGACTCATTA TATGACAGAA TTAAAGTGTA AAGCCTGTGG CGGTTATCGC
CTAAACAAGG CCGCACTTTC AGTCAAAATT AATGGCAAAC ATATTGGTGA GGTGTCGGAG
TTACCGGTTG ATCAAGAATT GGCATTTTTT AATAGTGTTT CCTTGGGACA ACAGGATAGT
GAGATTGCCT CGCCTATTAT CAAAGAAATT AAGGATCGTC TTGGCTTCCT ACAAAGCGTA
GGTTTAAAGT ATTTAACACT TTCTCGTTCA GCACGAACGC TTTCTGGCGG AGAATCTCAG
CGAATTCGTT TGGCTACTCA GATTGGATCT AATTTATCAG GAGTTCTTTA TGTTTTAGAT
GAACCTTCCA TTGGTTTGCA CCAGCGTGAC AATGATATGT TGCTAGAGTC AATGCATCGT
ATGCGTGACT TAGGAAATAC CTTAGTTGTT GTCGAGCACG ATGAAGATAC AATGCGTGCG
GCTGATTATT TGATAGATGT CGGCCCGGGT GCTGGTGCTT TGGGCGGTAC TATTGTGGCT
AGTGGCACGC CAGCTGAAGT TGAAGCCAAC AAAAGCTCAT TAACTGGACA ATATTTATCT
GGGAAAAAAT TTATTGCAAT ACCTGCCAAG CGCCGAAAAG GGAATGGCAA CTGGATTACG
GTGAAAGGCG CCAAAGAAAA TAACTTAAAA AACATTACTG CAAAGATACC TCTAGGAAAG
TTTGTTGCGG TAACAGGTGT TTCAGGTTCT GGTAAATCAA CATTAGTCAA TACAGTGTTG
AAGCGAGCTT TGAAGCAAAA ACTAAATAAT AACTCTGAAA AACCAGGTGC GTATCGATCG
ATTGAGGGCA CTGAAAATAT AGAACAAATA GTTGATATTG ATCAATCACC AATTGGACGT
ACACCACGTT CTAATCCTGC GACCTATACA GGTGTATTCG ATGATATTCG TGATTTGTTT
TCACAAACAA ATGAAGCTAA AATGCGTGGA TACAACAAAG GACGCTTTTC ATTTAACACA
AAAGGTGGTC GTTGTGAGAA TTGTCGTGGC GATGGTGTGA TCAAAATAGA AATGAATTTC
TTGCCTGATG TGTATGTAGC CTGTGAAGTT TGTGGTGGTA CTCGTTATAA TTCAGAAACG
TTGGAAGTTA CCTATAAAGG CAAAAATATA TCACAAGTCT TAGACATGAC TGCTTCAGAG
GCACTTGAAT TTTTCACGCC TATTCCAAAA ATTGCTAAAA AGCTACAAAC GATTAATGAT
GTGGGCTTGG GTTACGTAAA ACTAGGGCAA TCTGCAACGA CCTTGTCAGG TGGTGAAGCC
CAACGTATGA AATTGGCATC GGAACTTCAT CGACGCACTA ATGGTAAAAC AATTTATATT
CTGGATGAAC CAACTACTGG TTTACATACT GACGACATTG CTCGCTTGCT AGAAGTGCTG
GAACGGCTAG TAGATGCTGG CAATACTATT GTAGTTATTG AGCATAACTT GGATGTGATT
AAGTCAGCTG ATTGGATAAT TGACATGGGT CCAGAAGGCG GCGCTGGTGG TGGAAAAGTT
TTGGTCGCCG GCACACCTGA AAAGGTGATG AAAACGGCAG GATCTTATAC CGGTAAGTAC
TTGAAAGAAG TAATTGAGCG CGATTTGTCA CGAGCTTAA
|
|---|
| Protein sequence | MAKDHIEIRG ARAHNLKNID VNIPKNQLTV VTGLSGSGKS SLAFDTLYAE GQRRYVESLS
SYARQFLGQM DKPDVDSIDG LSPAISIDQK TTSNNPRSTV GTVTEINDYF RLLYARVGRP
DDPKDGTKIM YTIDQMVEYT LNNLPEGTRL QVFAPIIRGK RGSHETAFDH MRKQGYIRAR
VDGDIIEIDS QQLSLNKNKP HDIDVMIDRI VLRGNSRSRL FDSIEAAVRL NDGQVELDVV
TRDDENPVAP LKFSDHYLGE LKDFRAGRLE PRLFSFNAPL GACEFCQGLG VTREVDIDLV
IPDDAKTLNE GAILPWNPIS SNYYPEMLRQ FAEQFAIDMD TPFNKLPKKQ QDLILNGSDE
KDFHFHYKND FGGVRDVDIP FEGVINNIAR RFTETNSDFT REQMTHYMTE LKCKACGGYR
LNKAALSVKI NGKHIGEVSE LPVDQELAFF NSVSLGQQDS EIASPIIKEI KDRLGFLQSV
GLKYLTLSRS ARTLSGGESQ RIRLATQIGS NLSGVLYVLD EPSIGLHQRD NDMLLESMHR
MRDLGNTLVV VEHDEDTMRA ADYLIDVGPG AGALGGTIVA SGTPAEVEAN KSSLTGQYLS
GKKFIAIPAK RRKGNGNWIT VKGAKENNLK NITAKIPLGK FVAVTGVSGS GKSTLVNTVL
KRALKQKLNN NSEKPGAYRS IEGTENIEQI VDIDQSPIGR TPRSNPATYT GVFDDIRDLF
SQTNEAKMRG YNKGRFSFNT KGGRCENCRG DGVIKIEMNF LPDVYVACEV CGGTRYNSET
LEVTYKGKNI SQVLDMTASE ALEFFTPIPK IAKKLQTIND VGLGYVKLGQ SATTLSGGEA
QRMKLASELH RRTNGKTIYI LDEPTTGLHT DDIARLLEVL ERLVDAGNTI VVIEHNLDVI
KSADWIIDMG PEGGAGGGKV LVAGTPEKVM KTAGSYTGKY LKEVIERDLS RA
|
|---|
| |