Gene LEUM_0212 details

Gene Information

• Locus tag: LEUM_0212
• Symbol: rpsE
• ID: 4422113
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
• Kingdom: Bacteria
• Replicon accession: NC_008531
• Strand: +
• Start bp: 180493
• End bp: 180999
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 639673925
• Product: 30S ribosomal protein S5
• Protein accession: YP_817716
• Protein GI: 116617345
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000316
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGAAT TCGTTAATCC TAAGTCACTT GGTGAATTAG AAGAGAACGT TGTTGCTATT 
AACCGTGTCA CAAAGGTTGT CAAAGGTGGT CGTCGCTTGC GTTTCGCAGC TTTGGTCGTT 
GTTGGTGATA AGCAAGGACA CGTTGGTTTT GGTACTGGTA AAGCACAAGA AGTTCCTGAA 
GCTATCCGCA AGGCTATTGA AGATGCTAAG CGTAAGTTGA TTACTGTGCC AACAGTTTCT 
ACAACTATTC CTCATGATGT CCTTGGTGAA TGGGGCGGCG GTAAGATTTT AGTTAAGCCC 
GCCGAAGAAG GATCTGGTGT TGCCGCTGGT GGTGCAGCAC GTTCTGTTAT GGAACTTGCT 
GGTATTGCCG ATGTGACTGC TAAGTCACTT GGTTCAGCAA CACCAATTAA CGTTATTCGT 
GCTACTTTCG ACGCTCTTAC AAGCTTGAAA GATGCCGAAG AAGTTGCTAA GTTGCGTGGT 
GTTTCTTTAG AACACTTAGC TGAATAA 

 

Protein sequence

MVEFVNPKSL GELEENVVAI NRVTKVVKGG RRLRFAALVV VGDKQGHVGF GTGKAQEVPE 
AIRKAIEDAK RKLITVPTVS TTIPHDVLGE WGGGKILVKP AEEGSGVAAG GAARSVMELA 
GIADVTAKSL GSATPINVIR ATFDALTSLK DAEEVAKLRG VSLEHLAE