Gene LEUM_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0197 
SymbolrplD 
ID4422098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand+ 
Start bp173605 
End bp174228 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content41% 
IMG OID639673910 
Product50S ribosomal protein L4 
Protein accessionYP_817701 
Protein GI116617330 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00203095 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAG TTGCTGTATT AAAGCAAGAT GGTAGTCAAG CTGCAGAAAT TGAATTAAAT 
GACGCAGTAT TCGCCATCGA ACCTAACAAC GCCGTTATTA CTGATGCAGT ATTGATGCAA 
CGCGCATCAT TGCGTCAAGG TACACATGCT GTTAAGAATC GTTCTGCGGT TTCTGGTGGT 
GGACGTAAGC CTTGGAAGCA AAAGGGTACT GGTCGTGCAC GTGCCGGTTC AATTCGTGAA 
CCTCAGTTCC GTGGTGGTGG AATTGTTTTC GGACCTTCAC CACGTTCATA TGCTTACCGT 
ATTAACCGTA AGGCATATCA ATTGGCATTA AAGTCAGTTT TGTCACAAAA AGTCGCTGAT 
AACAAGTTGG TAGTTGTTGA TGCTTTGTCA TTTGAAGCAC CAAAAACACA AGACTTTAAG 
AAAGTTTTGG CAAACTTGTC AGCTGATAAA AAGACATTAG TAGTTGTTGA TGAAGACAAC 
GAAAACGCAA TCTTGTCAGC ACGTAACTTG GCTAATGTTC AAGTTATGAC AACAAAGGGT 
ATCAACGTGC TTGATGTTGT TAATGCAGAT AAGCTGGTGA TTGTTCAATC ATCAATCGAA 
GAAATCCAAG GAGGTCTTGC CTAA
 
Protein sequence
MTKVAVLKQD GSQAAEIELN DAVFAIEPNN AVITDAVLMQ RASLRQGTHA VKNRSAVSGG 
GRKPWKQKGT GRARAGSIRE PQFRGGGIVF GPSPRSYAYR INRKAYQLAL KSVLSQKVAD 
NKLVVVDALS FEAPKTQDFK KVLANLSADK KTLVVVDEDN ENAILSARNL ANVQVMTTKG 
INVLDVVNAD KLVIVQSSIE EIQGGLA