Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0194 |
Symbol | |
ID | 4422095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 171128 |
End bp | 172207 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639673907 |
Product | spermidine/putrescine-binding periplasmic protein |
Protein accession | YP_817698 |
Protein GI | 116617327 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TATTATCCAG TGTAGTGGGG ATATTAATTG TTGTTGCTTT ACTCATTAGT GCGCAGCATT ATTTTTCGGC ACAGACAGGC ACGGGGGACA AGAGCGGCAA AGTTTTGAAT TTATATAACT GGGGAGATTA TATTGATCCT GCCTTATTAA AAAAATTTAC CAAAGAAACT GGCTATAAAG TTAGTTATGA AACTTTTGAT TCAAACGAAG CGATGTATAT GAAAGTTAAG CAAGGCAGTA CATCGTACGA CTTAGCAGTG CCTTCAGAAT ATATGATTGA AAAAATGAAA GCAGATAATT TACTATTACC ACTTGACCAT AGTAAATTAA CTGGTTTGAA TAATTACGAT AGTCGTTTTC TAAATCAATC TTTTGATAAA GGCAATAAAT ATTCGGTTCC CTACTTTTGG GGTACACTTG GCATTATTTA CAATGATAAA TATGTCAAAG CCAAAGACAT TCAACATTGG GATGATCTTT GGTCATCAAA GTTTAAAAAT CAAATCATGT TAATTGATTC AGCAAGAGAT GTTTTGGGTA TCACTTTAAT TACACAAGGG AAGTCCGTGA ATAATAAATC GGTAGCTGAT TTAGCTGCAG CACAAGGAAA ACTAACAACC TTGATGCCGA ATGTCAAAGC GATTATTGCT GACGAGATTA AAATGTATAT GGCTCAGGAT GAAGCTGCAA TAGCCGTCAC CTATTCTGGT GAAGCTGCAG AAGCAATGGA CAAAAATTCT CATTTGCATT ATGTTGTACC TAATGAGGGA TCGAATTTGT GGTTTGACAA CATTGTGATG CCAAAAAATG CTAAACATAA AGCAGCAGCA TATGCATTTT TGAATTTCAT GAGTGAACCG AAAAACGCTG CTCAAAATGC AGAGTATATT GGTTATGCTA CACCAAATAA GAAGGCGTTG TCGTTATTAC CAAAATCAAT TCGGGAAGAT AAACAGTTTT ATCCAGATGA AAAAACAGTC CGAAATTTAC AAACATATGA TGATTTAGGA CAAAAATGGA CAGAGAAGTA TAATGATGCA TTCTTAGAGT TTAAGATGAC GCAGCGATGA
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Protein sequence | MKKLLSSVVG ILIVVALLIS AQHYFSAQTG TGDKSGKVLN LYNWGDYIDP ALLKKFTKET GYKVSYETFD SNEAMYMKVK QGSTSYDLAV PSEYMIEKMK ADNLLLPLDH SKLTGLNNYD SRFLNQSFDK GNKYSVPYFW GTLGIIYNDK YVKAKDIQHW DDLWSSKFKN QIMLIDSARD VLGITLITQG KSVNNKSVAD LAAAQGKLTT LMPNVKAIIA DEIKMYMAQD EAAIAVTYSG EAAEAMDKNS HLHYVVPNEG SNLWFDNIVM PKNAKHKAAA YAFLNFMSEP KNAAQNAEYI GYATPNKKAL SLLPKSIRED KQFYPDEKTV RNLQTYDDLG QKWTEKYNDA FLEFKMTQR
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