Gene LEUM_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0193 
Symbol 
ID4422094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp170296 
End bp171126 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content36% 
IMG OID639673906 
Productspermidine/putrescine ABC transporter permease protein 
Protein accessionYP_817697 
Protein GI116617326 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAA AATTTAGATG GTCTAATTTG TATTTAGTGT TTGTATTTGT TTTGTTGTAC 
TTACCTATTT TCTTTTTGAT TATTTACTCC TTTAATGCAG GAGATGTTAT GCAAGGATGG
GATGGCTTTT CGTTGAAGCA TTACACCGAG CTCTTTGTCG ACACAAGAAT TTTAGAGATT
GTGGTTAACA CATTTCTGGT TGCGTTATTA TCTTCACTAC TGGCTAGTAT AATTGGCACA
GCAGGGGCCC TATATATCTA TAATCAACGT CATCAATTGG CGAAAAATAT TTTCTTGTCA
CTTAATAATA TTTTACTTGT TTCTCCGGAT GTTATTATTG GCGCCTCATT TTTAATTCTA
TTTACCGTTG TTGGTTTTAC ACTCGGTTTT ACTTCCGTTC TACTTTCGCA TATTGCTTTT
AGTATACCGA TTGTTGTTTT GATGGTATTA CCTCGTTTAC AGGAGATGAA TCCTTATTTA
GTCACCGCAG CCAAGGATCT TGGTGCCAAT AATTTACAGA TGTTGTCTAG GGTAGTATTA
CCAGTTATAT CACCGGGAAT TTTAGCGGGA TTTTTTATGG CGTTTACTTA CTCACTGGAC
GACTTTGCAG TGACGTTCTT TGTAACAGGA AATGGTTTTT CAACTTTGTC AGTTGAAATA
TATTCCCGTG CGCGCCAAGG GGTTAGTTTA GAAATCAATG CGTTATCGGC CATGATGTTT
TTGGTTTCAC TACTATTAGT ATTAATCTAT TATTTTATTT CCAACAGATC TTCTAAAGGC
AAAAAGCGCG GCGGAACAAA CCTTGTAATG CCAGCTACGG AGGGACTGTA A
 
Protein sequence
MHKKFRWSNL YLVFVFVLLY LPIFFLIIYS FNAGDVMQGW DGFSLKHYTE LFVDTRILEI 
VVNTFLVALL SSLLASIIGT AGALYIYNQR HQLAKNIFLS LNNILLVSPD VIIGASFLIL
FTVVGFTLGF TSVLLSHIAF SIPIVVLMVL PRLQEMNPYL VTAAKDLGAN NLQMLSRVVL
PVISPGILAG FFMAFTYSLD DFAVTFFVTG NGFSTLSVEI YSRARQGVSL EINALSAMMF
LVSLLLVLIY YFISNRSSKG KKRGGTNLVM PATEGL