Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0130 |
Symbol | |
ID | 4422060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | + |
Start bp | 111678 |
End bp | 113024 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639673843 |
Product | xylose isomerase |
Protein accession | YP_817654 |
Protein GI | 116617283 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00829449 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAC TTTTTGATTT TCCCCAAGTA ACATTTGTAG GAATACAATC ATTACAAGCG GGTGATGGAT TTCATTATTA TAATCCAGAT GAAATAGTTA AAGGTAAGAA AATGAGTGAC TGGCTAAAGT TTTCAGTGAC TTATTGGCAT ACAATGGACC AACGCTTAGT AGACCCATTT GGTGAAGGAA CAGCAGTCCG GCCGTGGGAC AATCAAGGTA AACCAGATTC AATGGAGCAA GCATTAGCGA AGGTTGATTA TTTGTTTGAG TTTTTGGAAA AAACTGACGT TAATTACTTT GCCTTTCATG ATCGTGATCT TGCACCTGAA GGTCATACAC TTGCCGAAAC AAATAAAAAT TTAGATCAAG TTATTGACAA AATTGAACAA AAAATACATG AAACAGGTAA AAAACTTTTA TGGAATACTT CATCACTATT TACGAATAAA CGTTTTTTGG CTGGTGGCGC AACTACACCA TTTGCTGAGG TATTTGCTTA TGCAGCTGGA CAAATTAAGC ATTCATTAGA TATTGCCAAG CGCTTAGGAT CAGAATCATA TGTTTTCTGG GGCGGACGAG AAGGCTACGA CTTTCTATTA AATACTGACA CCAAACGTGA ATTAGACCAT ATTGCAGCAT TCTTTAAGCT AGCTAAGGAT TATGCAAATG AAATTGGTTA TCAGGGACAA TTCTTGATTG AACCCAAGCC CAAAGAACCA ACACAGCATC AATATGATTT TGATGTGCAA ACAACAATTG CTTTCTTGAA AACTTATGGA TTAGAGGATA CATTCAAGTT GAACTTGGAA GGCAATCACG CCTACTTAGC TGGTCACACG TATGAGCATG AAGTGAGATT TGCGCGAGAG GCTGGTTTGT TAGGGTCATT AGATGCTAAC ATGGGTGATA AGCTCACTGG TTGGGACATT GATGAATTTC CAAATGATGT TTATGAGGCG ACCTTAGTAA TGTATGAATT CTTGAAAAAC GGGGGTCTAC CAACTGGTGG TTTGAATTTT GATTCGAAAG CACGCCGTCA AAGTTTCCAA GCTGACGATT TGTTCTACGC GCATATTGCT GGTATGGATA CTTATGCTGC TGGCTTGAAA GTTGCTGCTA AGCTAATTGA TGACCAAGTG ATTGAAAATG TTCTGAAAGA GCGGTATGCT TCATTTGATT CGGGTATTGG CGCTGATTTT GAAGCTGGGA AAGTTACCTT AAAAGAATTG GCCACCTATA TTGAAAATAA AACAGATGAA GAAATCAACG CAACCCTCAA GTCAGGTCGC CAAGAACGAA TCAAACAAAC ATTGAATAAT TACATTTTTT CTGTACTTGG ATCTTAA
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Protein sequence | MAELFDFPQV TFVGIQSLQA GDGFHYYNPD EIVKGKKMSD WLKFSVTYWH TMDQRLVDPF GEGTAVRPWD NQGKPDSMEQ ALAKVDYLFE FLEKTDVNYF AFHDRDLAPE GHTLAETNKN LDQVIDKIEQ KIHETGKKLL WNTSSLFTNK RFLAGGATTP FAEVFAYAAG QIKHSLDIAK RLGSESYVFW GGREGYDFLL NTDTKRELDH IAAFFKLAKD YANEIGYQGQ FLIEPKPKEP TQHQYDFDVQ TTIAFLKTYG LEDTFKLNLE GNHAYLAGHT YEHEVRFARE AGLLGSLDAN MGDKLTGWDI DEFPNDVYEA TLVMYEFLKN GGLPTGGLNF DSKARRQSFQ ADDLFYAHIA GMDTYAAGLK VAAKLIDDQV IENVLKERYA SFDSGIGADF EAGKVTLKEL ATYIENKTDE EINATLKSGR QERIKQTLNN YIFSVLGS
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