Gene LEUM_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0130 
Symbol 
ID4422060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp111678 
End bp113024 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content38% 
IMG OID639673843 
Productxylose isomerase 
Protein accessionYP_817654 
Protein GI116617283 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2115] Xylose isomerase 
TIGRFAM ID[TIGR02630] xylose isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00829449 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAC TTTTTGATTT TCCCCAAGTA ACATTTGTAG GAATACAATC ATTACAAGCG 
GGTGATGGAT TTCATTATTA TAATCCAGAT GAAATAGTTA AAGGTAAGAA AATGAGTGAC
TGGCTAAAGT TTTCAGTGAC TTATTGGCAT ACAATGGACC AACGCTTAGT AGACCCATTT
GGTGAAGGAA CAGCAGTCCG GCCGTGGGAC AATCAAGGTA AACCAGATTC AATGGAGCAA
GCATTAGCGA AGGTTGATTA TTTGTTTGAG TTTTTGGAAA AAACTGACGT TAATTACTTT
GCCTTTCATG ATCGTGATCT TGCACCTGAA GGTCATACAC TTGCCGAAAC AAATAAAAAT
TTAGATCAAG TTATTGACAA AATTGAACAA AAAATACATG AAACAGGTAA AAAACTTTTA
TGGAATACTT CATCACTATT TACGAATAAA CGTTTTTTGG CTGGTGGCGC AACTACACCA
TTTGCTGAGG TATTTGCTTA TGCAGCTGGA CAAATTAAGC ATTCATTAGA TATTGCCAAG
CGCTTAGGAT CAGAATCATA TGTTTTCTGG GGCGGACGAG AAGGCTACGA CTTTCTATTA
AATACTGACA CCAAACGTGA ATTAGACCAT ATTGCAGCAT TCTTTAAGCT AGCTAAGGAT
TATGCAAATG AAATTGGTTA TCAGGGACAA TTCTTGATTG AACCCAAGCC CAAAGAACCA
ACACAGCATC AATATGATTT TGATGTGCAA ACAACAATTG CTTTCTTGAA AACTTATGGA
TTAGAGGATA CATTCAAGTT GAACTTGGAA GGCAATCACG CCTACTTAGC TGGTCACACG
TATGAGCATG AAGTGAGATT TGCGCGAGAG GCTGGTTTGT TAGGGTCATT AGATGCTAAC
ATGGGTGATA AGCTCACTGG TTGGGACATT GATGAATTTC CAAATGATGT TTATGAGGCG
ACCTTAGTAA TGTATGAATT CTTGAAAAAC GGGGGTCTAC CAACTGGTGG TTTGAATTTT
GATTCGAAAG CACGCCGTCA AAGTTTCCAA GCTGACGATT TGTTCTACGC GCATATTGCT
GGTATGGATA CTTATGCTGC TGGCTTGAAA GTTGCTGCTA AGCTAATTGA TGACCAAGTG
ATTGAAAATG TTCTGAAAGA GCGGTATGCT TCATTTGATT CGGGTATTGG CGCTGATTTT
GAAGCTGGGA AAGTTACCTT AAAAGAATTG GCCACCTATA TTGAAAATAA AACAGATGAA
GAAATCAACG CAACCCTCAA GTCAGGTCGC CAAGAACGAA TCAAACAAAC ATTGAATAAT
TACATTTTTT CTGTACTTGG ATCTTAA
 
Protein sequence
MAELFDFPQV TFVGIQSLQA GDGFHYYNPD EIVKGKKMSD WLKFSVTYWH TMDQRLVDPF 
GEGTAVRPWD NQGKPDSMEQ ALAKVDYLFE FLEKTDVNYF AFHDRDLAPE GHTLAETNKN
LDQVIDKIEQ KIHETGKKLL WNTSSLFTNK RFLAGGATTP FAEVFAYAAG QIKHSLDIAK
RLGSESYVFW GGREGYDFLL NTDTKRELDH IAAFFKLAKD YANEIGYQGQ FLIEPKPKEP
TQHQYDFDVQ TTIAFLKTYG LEDTFKLNLE GNHAYLAGHT YEHEVRFARE AGLLGSLDAN
MGDKLTGWDI DEFPNDVYEA TLVMYEFLKN GGLPTGGLNF DSKARRQSFQ ADDLFYAHIA
GMDTYAAGLK VAAKLIDDQV IENVLKERYA SFDSGIGADF EAGKVTLKEL ATYIENKTDE
EINATLKSGR QERIKQTLNN YIFSVLGS