Gene LEUM_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0079 
Symbol 
ID4421955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp66304 
End bp67308 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content41% 
IMG OID639673793 
ProductABC-type uncharacterized transport system, periplasmic component 
Protein accessionYP_817604 
Protein GI116617233 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0035536 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC GACTTTTGTC GGCAATTACA ATTATTGTTG CATTTCTAGC CGTAGCATTT 
ATTGTTACTA GCAAACCAAA CACACAAGAA AAAAAATCAA CTTACGTGCC AACTGTTGGC
ATTTTGCAAC TAGTTACACA CCCTGCCTTA GATCAAATTC ATCATGGTAT TGTTGCGGGA
CTAAAATCTC AAGGTTACTC AGGTAAAAAG ATTAAGATTG ACTATCAAAA TGCTCAGGCT
GACCAATCAA ATCTCAAAAC AATGTCACAA AAATTTGCCA ATGAGAATGC TGATTTAACA
ATCGGAATTG CCACACCAGC TGCCTTATCC TTAGCCAAAA CAGCTGATGG TAATAATCCG
GTTATTCTAG CCGGAATTAC AGACCCAGCG GGGTCTGGAT TAGTCAAAAC AACGCAACGC
CCGGGAAATA ATGTGACCGG TGTTTCTGGT GACTCTCCTT TGCAGCAACA TTTAGATGTG
GTTCAACAAG TCGTTCCCAA AGCTAAAACA TTAGGTATTA TTTACACAAC ATCAGATCAT
GGTGGTGAAT ATAATGCTAA AAACATGGAA AAACTGGCTA AAAAAGCTGG CTACACTGTT
AAAATGTACA CTATTTCAAC AACTAACGAT ATGCAACAAG TTGCCGAAAC AATGGCCAGC
CAAGTTGATG TTGTCTATGC ACCGCAAGAT AACGGCGTTG CAAGTGCTAT GAAAACACTC
ATTAACGTCA CCAACCAAGA AAAAATTCCA GTTATCCCTG CCGTGGATAC CATGGTGAAG
GATGGTGGCG TCGCCACTGT ATCCGTTAGC CAGTATGATA TAGGTTATCA AGCCGGTGTC
ATGGCCGGAC AAGTCTTAAA GGGCAAGAAC ACCGCAACCT ACCCTGTCAA AACCATTACA
AAGGGCGAAA TGACCATCAA CTTAAAGCAA GCCAAACTGC TAGGTATCAA TTTGCCAGCA
AGCATGGTTA AGGAAGCTGA AACTAAAGGA GAAGTCTTCA AATGA
 
Protein sequence
MNKRLLSAIT IIVAFLAVAF IVTSKPNTQE KKSTYVPTVG ILQLVTHPAL DQIHHGIVAG 
LKSQGYSGKK IKIDYQNAQA DQSNLKTMSQ KFANENADLT IGIATPAALS LAKTADGNNP
VILAGITDPA GSGLVKTTQR PGNNVTGVSG DSPLQQHLDV VQQVVPKAKT LGIIYTTSDH
GGEYNAKNME KLAKKAGYTV KMYTISTTND MQQVAETMAS QVDVVYAPQD NGVASAMKTL
INVTNQEKIP VIPAVDTMVK DGGVATVSVS QYDIGYQAGV MAGQVLKGKN TATYPVKTIT
KGEMTINLKQ AKLLGINLPA SMVKEAETKG EVFK