Gene LEUM_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0078 
Symbol 
ID4421954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp65408 
End bp66307 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content39% 
IMG OID639673792 
Productribose/xylose/arabinose/galactoside ABC-type transporter permease 
Protein accessionYP_817603 
Protein GI116617232 
COG category[R] General function prediction only 
COG ID[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGA TTGTATCTAG TATTGGGCAA GGTCTCTTAT GGGCCGTGCT CGGTGTCGCG 
TTGTTTCTCA CATTTCGAAT TTTAAACTTT CCTGATATGA CCGTTGAAGG CTCTTTCCCT
TTAGGTGCGT CAACAGCAGT AGCGATGATT GCTCACGGAA TTGACCCATT TATCGCGACC
ATTGCCGCTT TCTTAGTCGG CACAATTGCT GGGTTAATTA CTGGGTTACT TTATACCAAA
GGAAAAATTC CTATTCTTTT ATCTGGTATC TTAGTCATGA CGGCAACATT ATCTATTAAT
CTCCGTATTA TGGGTTCAGC AAATATTTCA TTGCTAAATC AAAAGTCGAT TTTCTCTATC
AAAATATTGC AGCACTTACC AAAATATTTT GACTCTGTTT TCTTAGGCTT GGTTATTATT
GCTGTCATCA CAGCAGGATT AATTTTTTTC TTGCAAACCG AATTAGGACA AGCCTTTATT
GCTACCGGTG ACAACCCTAA CATGGCACAA TCAATTGGGA TTCAAACGGA CCGCATGACA
ATCATGGGAC TAATGTTGTC CAATGGTCTT ATCGCCTTCG GAGGCGCTGT TATCGCACAA
AATAATGGTT ATGCTGACAT CAACATGGGT ATTGGCATTA TCGTTATTGC TTTAGCTTCA
ATTATTATCG GCGAAGTTGT TTTCGGTGAA TTAACATTAA ATGAGCGTTT AGTTGCCGTT
ATTGTCGGTT CTATTCTATA CCGTTTAGTC TTATTAGCTG TCCTACGACT TGGTTTTTCT
ACTAACGACA TCAACCTTAT TTCAGCTATC GTCTTAGCTG CTGCTATGAT TTTGCCGCAA
CTGCGTCATG CGCTGAATCT CGATAAAATA ATTAAGAAAG GTGTTACACC ACATGACTAA
 
Protein sequence
MSMIVSSIGQ GLLWAVLGVA LFLTFRILNF PDMTVEGSFP LGASTAVAMI AHGIDPFIAT 
IAAFLVGTIA GLITGLLYTK GKIPILLSGI LVMTATLSIN LRIMGSANIS LLNQKSIFSI
KILQHLPKYF DSVFLGLVII AVITAGLIFF LQTELGQAFI ATGDNPNMAQ SIGIQTDRMT
IMGLMLSNGL IAFGGAVIAQ NNGYADINMG IGIIVIALAS IIIGEVVFGE LTLNERLVAV
IVGSILYRLV LLAVLRLGFS TNDINLISAI VLAAAMILPQ LRHALNLDKI IKKGVTPHD