| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_0046 |
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| Symbol | |
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| ID | 4423526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008531 |
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| Strand | + |
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| Start bp | 37588 |
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| End bp | 38481 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639673760 |
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| Product | pseudouridylate synthase, 23S RNA-specific |
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| Protein accession | YP_817572 |
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| Protein GI | 116617201 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGT GGCAGTATAA TTTTATAATA ACATCCCAGA ATTCTGGCCA AACTGTTAAG
GAACTATTGA TAAAATGGTA CGTGCCACAA AGGATTCGCG GCGCTTTGCG AATTAAAAAG
CATTTTAGTG TGAACAATAT TATTGTACCT ACCAACTATG AATTACGAAC AGGGGATCAG
TTGCAGCTTA ATTTCGATGC AGATGACTTT CGTACTAGTG AATCAAATTA TCTACCCAAC
CATCAGAAGT CGGTAAATAT CATTTTTGAA AATAAAGACT TGGTTGTTAT TGATAAACCT
GCAGGAATGA AAATGCATCC GCATTCGCCA ACGGAAACTG ATACTTTGTT GAACTATTTA
GCAGGTGAGT TTATTCAGCG AAAGGTCAGT GATCAGCCTT ATATGGTTCA CAGGATAGAT
CGAGCAACTT CAGGTTTAGT AATTGTAGCA AAGAACCCCG TCGTGGTACC AATTCTAGAT
AGAATGTTAG CAGATAAACG GATTGTACGA ACTTATGTAA CGTGGGTTAG TGGCGTCGTG
CAAGATAATC ATGGTACAAT CGCAAAACCG ATAGGAATCG ACGCTCGAGA TGATCGAAAA
CGTGCCGTTG ACGGGAAAGA AGCCCAAGTG GCGATGACAC ATTGGTGGCG AATGCATACG
GTGTTTTGCA GTTCATTACT ACGGGTGCAA TTAAGTACGG GGCGCATGCA TCAGATACGC
GTGCACTTAG CTAGTATAGG ACACCCTATT GTTGGGGATG AACTATACGG TGGAGTATAC
AATGGCCGTA TGCTGCTACA TTCAGCAACC ATAAAAATAC CATTGCCGTT TGATGAGGGA
GTAAGAATGA TTACAGGACC ACTCCCAAGC GATTTTCCAA GACAGCTACG ATAA
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| Protein sequence | MKKWQYNFII TSQNSGQTVK ELLIKWYVPQ RIRGALRIKK HFSVNNIIVP TNYELRTGDQ
LQLNFDADDF RTSESNYLPN HQKSVNIIFE NKDLVVIDKP AGMKMHPHSP TETDTLLNYL
AGEFIQRKVS DQPYMVHRID RATSGLVIVA KNPVVVPILD RMLADKRIVR TYVTWVSGVV
QDNHGTIAKP IGIDARDDRK RAVDGKEAQV AMTHWWRMHT VFCSSLLRVQ LSTGRMHQIR
VHLASIGHPI VGDELYGGVY NGRMLLHSAT IKIPLPFDEG VRMITGPLPS DFPRQLR
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