Gene LEUM_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_0038 
Symbol 
ID4423518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp29609 
End bp30814 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content37% 
IMG OID639673752 
Productmajor facilitator superfamily permease 
Protein accessionYP_817564 
Protein GI116617193 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA AATTATTTAA TAAAGGCTTT TTAACAATTA CTATTATTAA CTTTATCGTG 
TACTTAGTGT ATTATCTGAT GATGGTTATA ATTGCTGTTG TTGCACACAA TCAACTACAT
GCTTCGTTTG GGCAAGCGGG ATTGGCCTCT GGGATTTATA TCATAGGAAC GTTAATAGCT
CGGCTAATAG TTGGAAAAGA GTTAGAACTA ATCGGACGGA AAAAGATTGT TCGATGGGGC
GCTATTCTAT ATTTAATTAC AACAATTGCT TACTTATTTG TACCAACAGT CGCTATATTA
GATGCGGTAC GTCTCTTTAA TGGTTTTGCG TACGGAATGA CTTCAACAGC CCTAAATGCT
ATTGTGACCG AATTTATTCC TGAGAAACGC AAAGGAGAGG GTATAAATTA TTATGGGTTG
AGTACAAGCT TAGCTGCGGC TATTGGCCCC TTCATTGGTT TATTGTTATT GAATGCAACT
AGTTTTCGAT TTATCGTGAT ATTATCGGTT ATCTTAATTG GAATTTCAAT GGTTGCATTG
TTTGCAATTA AAATTAACAA TGTGACGCTT TCACCAGAAC ATTTATCCGA ATTGAAGTCT
TGGAAGGTTT CTAGTTTCAT TGAATTTAAA GTATTATTAA TTGCTGGTGT AGGATTTTTG
ATGGGCTTGT CTTATTCGTC AGTACTATCA TTTTTGGCTT CATATGCGGA AACTTTGAAC
TTGGTTTCAA TTAGTTCATT CTTTTTCGTA GTCTATGCCG GTATTGTAAC ATTGACAAGG
CCAATGTCAG GACGTATTTT TGATCGCTTT GGTGAAAATT ACGTTATGTA TCCGAGCTAC
TTTTTCTTAG CTCTTGGTTT AGTTGTTTTG GCATTGACTC ATAATGGATT TACTTTGTTA
TTGTCCGGCG CATTCATTGG TTTAGGATAT GGAACATTCA TGTCAAATGG TCAAGCGGTT
TCCTTAAAGT TAGTTTCGAG TCATCGTGTC GGTATTGCTT TATCAACATA CTTCATCGGC
TTGGACTTGG GGTTAGGTGT CGGACCATAC GCTCTTGGTG CTTTACACGC CGTGTTGACA
TTCCGTGAAC TGTATTTGGT TTCAGCTGTT ATTCCCGTGA TTTCAGCAAT ACTTTATCTG
GTATTTTATC ATCCAGATCG CATCAAAAAA AATGTAGCAA CCATTCCTAG CGAGGAATTA
GCTTAA
 
Protein sequence
MEEKLFNKGF LTITIINFIV YLVYYLMMVI IAVVAHNQLH ASFGQAGLAS GIYIIGTLIA 
RLIVGKELEL IGRKKIVRWG AILYLITTIA YLFVPTVAIL DAVRLFNGFA YGMTSTALNA
IVTEFIPEKR KGEGINYYGL STSLAAAIGP FIGLLLLNAT SFRFIVILSV ILIGISMVAL
FAIKINNVTL SPEHLSELKS WKVSSFIEFK VLLIAGVGFL MGLSYSSVLS FLASYAETLN
LVSISSFFFV VYAGIVTLTR PMSGRIFDRF GENYVMYPSY FFLALGLVVL ALTHNGFTLL
LSGAFIGLGY GTFMSNGQAV SLKLVSSHRV GIALSTYFIG LDLGLGVGPY ALGALHAVLT
FRELYLVSAV IPVISAILYL VFYHPDRIKK NVATIPSEEL A