| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1897 |
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| Symbol | rnpA |
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| ID | 4438924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1893451 |
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| End bp | 1893819 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639673713 |
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| Product | ribonuclease P |
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| Protein accession | YP_819590 |
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| Protein GI | 116630437 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0594] RNase P protein component |
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| TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 3.53987e-16 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 4.71177e-26 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGAGAAAAA GCTACCGTGT AAAAACTGAG AGAGACTTTC AAAAAGTTTT TAAAGAAGGA
CAGTCGATGG CTAATAGAGG CTTTGTTGTC TATACTTTGC CCAAAGAAAA ACAAAAGCAT
TTTCGCGTTG GAATTTCTGT TGGGAAAAAG GTGGGTCATA CGGCGGTAGC ACGTAATCGC
CTCAAACGGT TCATTCGTGC TACACTGACA GAACTTAAGC CAGAGATAAG GTCTGATTTA
GACTTTTTAG TAATCGCTAG GCCCTATGCA AGAGATTTTG ACATGGAACG AACCAAAAAG
AATCTTATTC ATGTCTTAAG GCTAGCTAAA GTCTTATCAA ACGAAGAGAC GGAAACTGAG
GAAAAGTAG
|
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| Protein sequence | MRKSYRVKTE RDFQKVFKEG QSMANRGFVV YTLPKEKQKH FRVGISVGKK VGHTAVARNR
LKRFIRATLT ELKPEIRSDL DFLVIARPYA RDFDMERTKK NLIHVLRLAK VLSNEETETE
EK
|
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