| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1881 |
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| Symbol | |
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| ID | 4438908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1871717 |
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| End bp | 1873816 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639673697 |
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| Product | arginine/lysine/ornithine decarboxylase |
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| Protein accession | YP_819574 |
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| Protein GI | 116630421 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0000000000741442 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTTTC TAAAAATTGC ACTAAGCAAT GGACTTAAAA ATAATAATTT TAATTCATGG
CAAACTACTA ATTTGAATAA TAAACCTCAA GCTAGTGAAC TTGCCGCTAT TGTTTTAGCA
GAGGGCGACC AAGATAGTCT TAAAACTGCT CAAGATCTAC AAAAAACTTC TGGCCTTGGA
ATTCCTATTA TTGAAGTTTC ACATGAAACA ATTTCTAATA ATGAAAAAAG AAAAATAATT
AACGCAGCAA ATAAATACAC CAAAAAAATG GTCCCAGGCT TTTTAACTGA TTTAGTTAAT
TTTGCTGAAG ATCATCCAGT AAGCTTTACT ACTCCTGGTC ACCACAATGG CCTCTACTAT
GAAAAACACC CCGCTGGCGT TGTCTTCAAT CGCTTCTTTG GTAAGAACCT GATGTTTGCA
GATACTAGTG ACACCGTACC TGAACTAGGC GACACTATGA CGCACGAAGG GACACCTTTA
ACTGCTGAAC AAAAGGCTGC TGAAACTTAT CACGCTGACA AAGTTTACTT TTGTACTAAT
GGAACTACTA GTGCTAACTC AATTTGTGCT AGTGCCTTAC TGACGAAAGA TGATCTAGTT
CTCTTTGATC GTAACAATCA TAAATCACTT TATAACAGCG CCTTAGTTAT GAGTGGAGCT
AAACCAGTGT ACATTCCAAC TGATCGAAAT GCACTTGGTT TAATTGGAGA AATGGATCCT
AATTTTTTAA GTGAAGAAAA AATTAGAGCA GAAGTTGCTA AAGTTGACCC TAAAAAAGCG
AAAGCTAAGC GGCCATTTAG ATTAGCTATT ATTCAGTCAG AAACTTATGA CGGCCTTTTC
TATGACGCTA AATGGATGAT CGATAAGATT GGTAAGCTTT GCGACTATAT TCTATTTGAC
TGTGCTTGGG GCGGATTTGA ACAATTCGTA CCAATTATGA ATCATTTATC TCCCCTTAAT
TTAGATTTGG GCCCAGAAGA CCCAGGTATC TTAGTAACCC AATCACTCCA TAAGCAACAA
GCGGGGATGG GACAAGCTTC CCAAATTCTA AAAAAAGATG CTCACATCAA AGGCCAAAAA
CGCTATGTTG ATCATAAGCA CTTTAATCAT GCTTATCTTA AATTTGTCAC TTCAAGCTAT
TCATATCCTC TTTATGCTTC CTTAACAGTT AACTCATACT TAACAAGTGG CGAAGGCAAT
AAAAAATGGT GGGATAAAAT ATTACGACTA GGAATTGAAT GGCGTAAGGA ACTGATTAGA
AAGTCAAAAT TATTTAGACC ACTCGTAATT GATAATTTTG AAAATATTAG TACTGACGAC
TTAGCAACAA ATGAAAAATA CTGGGACTTA GAACCTAACA ATCTTTGGCA TGGCTTTAGT
AAAATTGCGA CTGGTCAAGC AATGATTGAT CCACTAAAAA TTACAGTAGT CACTCCTGGC
ATTGATGTTA AAAGCGCAAA ATATGAAGAC ATAGGAATCC CTGGTCCAGT AGTGGCAGAG
TTTCTAATGG AAAAGAGAAT TATTCGTGCA AAAGATGATT TGTACTCCCT CCTCTTCCTG
CTTACACCTG GCGATACCAA AGCTGAATTA GATACACTAC TGAATGCATT TTTAGAGTTT
GAACAATACT ATAACGAAGA TGCACCATTA GAAAAAGTAT TACCTAAACT GACTAAAGTA
TATGGCGATC GCTACAAGGG TTATACTTTA AAGCAGCTTT GCCAAGAAAT GCATAATTAT
TACCGGGGAA ATAAAACTTT CACTTTGCAG CAAGAGCTAT TTGCTAAACC AAATATGCAA
AATTACCCAA TGACACCAGA ACATGCTGAC TATCTCTTTA TGAAAAATGA AAGTGAGCTA
GTTAACCTAG ATGATGTTAA AGGAAGAATT GCGGCCGAAG GTGCACTTCC CTATCCACCA
GGTGTCTTTA TCGTTGCCCC AGGGGAAAAA TGGAGCGATA TTGATCAAAA GTACTTTGAA
GTTTTAGTAG GAGCAATCGA GCGCTTCCCT GGCTTTGTAC CTGAAATTCA GGGCGTTTAC
TGGGATCAAA AAGCAGATGG TAAAATAAGA GTACAAGCAG AAGTATTAAA GGAGAATTAA
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| Protein sequence | MNFLKIALSN GLKNNNFNSW QTTNLNNKPQ ASELAAIVLA EGDQDSLKTA QDLQKTSGLG
IPIIEVSHET ISNNEKRKII NAANKYTKKM VPGFLTDLVN FAEDHPVSFT TPGHHNGLYY
EKHPAGVVFN RFFGKNLMFA DTSDTVPELG DTMTHEGTPL TAEQKAAETY HADKVYFCTN
GTTSANSICA SALLTKDDLV LFDRNNHKSL YNSALVMSGA KPVYIPTDRN ALGLIGEMDP
NFLSEEKIRA EVAKVDPKKA KAKRPFRLAI IQSETYDGLF YDAKWMIDKI GKLCDYILFD
CAWGGFEQFV PIMNHLSPLN LDLGPEDPGI LVTQSLHKQQ AGMGQASQIL KKDAHIKGQK
RYVDHKHFNH AYLKFVTSSY SYPLYASLTV NSYLTSGEGN KKWWDKILRL GIEWRKELIR
KSKLFRPLVI DNFENISTDD LATNEKYWDL EPNNLWHGFS KIATGQAMID PLKITVVTPG
IDVKSAKYED IGIPGPVVAE FLMEKRIIRA KDDLYSLLFL LTPGDTKAEL DTLLNAFLEF
EQYYNEDAPL EKVLPKLTKV YGDRYKGYTL KQLCQEMHNY YRGNKTFTLQ QELFAKPNMQ
NYPMTPEHAD YLFMKNESEL VNLDDVKGRI AAEGALPYPP GVFIVAPGEK WSDIDQKYFE
VLVGAIERFP GFVPEIQGVY WDQKADGKIR VQAEVLKEN
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