| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1880 |
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| Symbol | |
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| ID | 4438907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1869995 |
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| End bp | 1871473 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639673696 |
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| Product | amino acid transporter |
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| Protein accession | YP_819573 |
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| Protein GI | 116630420 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000114764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000000000709791 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATAAAC CAGATGTCTT AAATGATTTA GAACCGAATA AAAAGCACTA TATGAGTTGG
CCTGTTATTG CGCTGATTGA CTTTGTAACG ATTATTAGTT TTGAAAATAT CTTCTATCCA
TTTCAAAACC AAGGACTTTC AGTTGTAATT TCTTGGATCT TTCTTTTATT TACTTACGTT
ATTCCTTACG CATTGATTAG TAGTCAGATG AGTTTGACTT TTGATAATCA AGACGGTGGA
CTTGCTTCTT GGGTCAGAAG AAGTACAAAC GATACCTTAG GATACTGGAC CTCTTGGATG
TATTGGGTGC AGAGTGTGCC ATATATCGTT GATGTATCAA ACTCAGTTAT TGTTTCATTT
AGCTGGATGA TTTTTGGCAA CAACAGCTTA GACAAGAAGA TGTCGACCTT TTGGTTCGGA
ATCTTAACTT TTGTGATCAT TTTGATCTTT ATTTTATTAG AAAACAAACT TCGTAATTCA
CTAGAAATTC TTTCTTTAAT TGGTGGGGGA GCAATGTTCA TTATGTCAAT GCTCTTTGTA
TTGCTTGCTG CATGGTCAGT AATGCATGGA CACCATATTG CAACTCAACC ATTTAACTGG
GGAGCATTTA AGCCTTCATT CAGTTTGAAT TACTTCTCAA CTACTGGTCT TTTGATCTTT
GCAATGTCTG GTGCTGAACT TGCTGCACCT TACGTACAAC AAATGAAGAA TCCTAAGAGA
GATTTTCCAA AAGCAATGTG GATGCTTGCT ATTATGACTG GTTTCTTAAC GATTTTTGGA
ACCTTGGCTT TAGCAATGTT CTTTAACGCT CACCATATTC CACATGACTT CAAGATGAAT
GGACCTTACT ACGCTTTCCA ATTACTTGGT GAAAGCTTAG GTGTAGGTAA GGTGTTAATG
TACATCTTTG CGGTTGTGCA AGCAATCTTC ATGATGGCTC AACTTGCAGT GTTACTTGAT
GCATCAAGTC GTGTATTTGC AGGGGATGTT GGTTCTAAGT TCATGCCTAA ATGGCTTACT
AAGAAAAACA AGAATGGACG TCCAATTCAC TCGTACACAT TTACTGTTGG ACTTAGCTTG
TTCTTATTAC TCTTAACAGG AACGTTGCCT AACATTAATA CCATCTATAA CTGGCTATTG
AACGTTAACG GAATTATTTC ACCATATAAG ACTTGTTGGG TATTCTTTGC TTTTGTAGCA
ATGAGAATGC ACCAAGATAA GTACCACTCA GACTATGTCT TTATTAAAAA TAAGGCTGGT
GCTTTAACTG TTGGTGGTTG GTGCTTACTA TTTACCTTTG TCTGTGCTAC TTTAGGATTT
ATCCCTCAAA ACGTTGCAGT AGGCACTAAG GCCTTTACTC ACCAATTATG GATGAACATT
ATTACTGTTG TAGTATTGTT TGGATTAGGA TTCGTTTTAC CATGGCTTAG AAAACGTGAA
GCTAAACGTG AACAAGCAAT GGGTGAAAAA TTAGACTAA
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| Protein sequence | MDKPDVLNDL EPNKKHYMSW PVIALIDFVT IISFENIFYP FQNQGLSVVI SWIFLLFTYV
IPYALISSQM SLTFDNQDGG LASWVRRSTN DTLGYWTSWM YWVQSVPYIV DVSNSVIVSF
SWMIFGNNSL DKKMSTFWFG ILTFVIILIF ILLENKLRNS LEILSLIGGG AMFIMSMLFV
LLAAWSVMHG HHIATQPFNW GAFKPSFSLN YFSTTGLLIF AMSGAELAAP YVQQMKNPKR
DFPKAMWMLA IMTGFLTIFG TLALAMFFNA HHIPHDFKMN GPYYAFQLLG ESLGVGKVLM
YIFAVVQAIF MMAQLAVLLD ASSRVFAGDV GSKFMPKWLT KKNKNGRPIH SYTFTVGLSL
FLLLLTGTLP NINTIYNWLL NVNGIISPYK TCWVFFAFVA MRMHQDKYHS DYVFIKNKAG
ALTVGGWCLL FTFVCATLGF IPQNVAVGTK AFTHQLWMNI ITVVVLFGLG FVLPWLRKRE
AKREQAMGEK LD
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