Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1876 |
Symbol | |
ID | 4438938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1864887 |
End bp | 1866821 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639673692 |
Product | cation transport ATPase |
Protein accession | YP_819569 |
Protein GI | 116630416 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.000000004202 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACTAT CAAATATTAA GCGTTTTTGG ATATCATTCA TCCTATCTAT TCCAATGCTT ATTCAAATGT TCGCCATGCC TTTTCATTGG ATGATGCCAG GATATAACTG GATTGCGCTT ATTACGACTA CGATCATTAT GGCGATTTCT GCCCTACCTT ATTGGAAAAG TGCAATTGCT GCTTTCAAAA AGCACAGTGC TAATATGAAC ACCCTAGTTG CTACAGGTAC AGCAGTTGCT TACTTCTATA GTATCTTTGC GATGATTACC AACCGTCCAG TTTACTTTGA AAGTGCAGCC TTTGTTACTG TCTTTGTCCT ACTTGGTGAT GCGATGGAAG AAAAGATGCA CGATAACGCA TCAAACGCTC TAGGTAAATT GATGGGCTTG CAAGCAAAAG ATGCCGAAGT TCAAAGAGAT GGTAAGTTCG TTAAACTTCC ACTTGATCAA GTTAAAGTTG GCGACATTAT CCGCGTTAAG CCAGGTGAAA AGATTCCAGT TGATGGCGAA ATCTTAGAAG GTGTTACAAC GCTTGATGAA TCAATGGTTA CCGGCGAAAG TATGCCAGTT GTCAAAAAAG TTGGTGACAC CGTTGTAGGT TCCACTATTA ATAGTAACGG CACAATTACT TTCAAAGCCA CTAAGGTGGG CTCCGACACA ATGCTCGCTC AAATTGTTGA CTTAGTTAAA AAAGCGCAAA CTAGTCACGC TCCAATTCAA AATTTAACAG ATAAGATATC CAATATCTTT GTTCCAGCTG TAATGATTAT CGCTATTTTA ACTTTTATTA TCTGGTATTC ATTTTTAGGT GCGACTGCTG TAGAAGCCAT GCTATTTGCC GTTAGCGTTA TCGTCATTGC CTGCCCATGT GCTTTAGGTT TAGCCACACC AACCGCATTA ATGGTCGGAA CTGCTCGCAG CGCCAAAATG GGCGTCTTAA TCAAAAACGG TGAAGTATTA CAAGAAGTTA GCGACTTAGA TACAGTTGTA TTTGATAAAA CTGGTACTAT CACAGTCGGT AAGCCAGAGG TGACTGACGT TGTAGGTGAT CAAAAGCAAG TTCTAACTAT TGCTGCTAGC CTAGAAGAGT CCTCGGAGCA CCCTCTTGCT ACAGCAATTG TCAAAAAAGC TGAAACTGAA AAATTAGCAA TTGAAAAAGT TGATGATTTT GAAGCAATTG AAGGTAAAGG CGTTAAGGCT AACTACAATG GTCAAACTGC TTTTGTTGGT AGTGATCGCT TACTGGCAGA TGTTGATATT TCCCAGGAAA TGTCACAAAA AGGTACTGCC TTACAAAATG AAGCTAAAAC GGTAGTCTAT GTTGGCTTAG ACGGGAAAAT TATTGGCTTA GTTGCTATTC AAGATGTACC AAAGCCAAGT TCACATGAAG CTATTAAAGA GCTAAGAGAG CGTGGTTTAA AGACCATCAT GCTTACAGGA GACAATAAGA ATGTCGCTGA AGCTATTGCT AAACAAGTAG GTATTGACCA AGTCATTGCT GGAGTTTTAC CTAATGAAAA AGCAATGCAC ATTCAAGAAC TCCAAGAACA AGGTAAGAAA GTTGCTTTTG TAGGTGACGG AATTAATGAT GCTCCAGCAC TTTCAACTGC TGATGTTGGA ATCGCTATGG GATCAGGAAC TGACATTGCC ATTGACTCTG GTGGTATCGT CTTAGTTCAA AATGACCTAC GTGGTGTTGT TCGCGCACTT GATATTTCTA AGAAGACATT TAACAGAATT AAGTTGAACC TCTTCTGGGC TCTAATTTAC AATACAATTG GTATTCCAAT TGCAGCAGGA TTATTTGTTG GCTTAGGATT TACTCTTAGT CCTGAATTAG CTGGTTTAGC TATGGCATTT TCATCCGTTT CTGTAGTTGG TAGTTCATTG ATGCTTAATA AAACAAAAAT TGCTGGTGAT ACAGCTAAAG CATAG
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Protein sequence | MKLSNIKRFW ISFILSIPML IQMFAMPFHW MMPGYNWIAL ITTTIIMAIS ALPYWKSAIA AFKKHSANMN TLVATGTAVA YFYSIFAMIT NRPVYFESAA FVTVFVLLGD AMEEKMHDNA SNALGKLMGL QAKDAEVQRD GKFVKLPLDQ VKVGDIIRVK PGEKIPVDGE ILEGVTTLDE SMVTGESMPV VKKVGDTVVG STINSNGTIT FKATKVGSDT MLAQIVDLVK KAQTSHAPIQ NLTDKISNIF VPAVMIIAIL TFIIWYSFLG ATAVEAMLFA VSVIVIACPC ALGLATPTAL MVGTARSAKM GVLIKNGEVL QEVSDLDTVV FDKTGTITVG KPEVTDVVGD QKQVLTIAAS LEESSEHPLA TAIVKKAETE KLAIEKVDDF EAIEGKGVKA NYNGQTAFVG SDRLLADVDI SQEMSQKGTA LQNEAKTVVY VGLDGKIIGL VAIQDVPKPS SHEAIKELRE RGLKTIMLTG DNKNVAEAIA KQVGIDQVIA GVLPNEKAMH IQELQEQGKK VAFVGDGIND APALSTADVG IAMGSGTDIA IDSGGIVLVQ NDLRGVVRAL DISKKTFNRI KLNLFWALIY NTIGIPIAAG LFVGLGFTLS PELAGLAMAF SSVSVVGSSL MLNKTKIAGD TAKA
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