| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1872 |
|---|
| Symbol | |
|---|
| ID | 4438934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1863042 |
|---|
| End bp | 1863599 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639673688 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_819565 |
|---|
| Protein GI | 116630412 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1.65971e-16 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0000000021295 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATA AAAGATGGAT TGAATTAGCA AAAAGAAAAA AGCAAGATAA GTATTTTGGA
TTTATCAGTT TGCTGATTGT AGTTATGATG GTCTTTTTTA CTGTAAAAAA CATCGGCTGG
CTACTCATTT TTATTGTGGT GGCGGTTATT CTTTATTTCT GGATTGATGT GGAACAAATG
CTAGAAGATA GTAAGGTAAT TAGTCGCACG CAAAAAATTA TTTTTATTGT TCTTGGTACA
ATTTACGAGC TTATGAGTAT TATTTTTGTC TTTGTTAATT TAGATTTTTT ATTAGTGGCA
TTTGGAATTG TCAGTGCTGG ATATTTGGGC TTTAAAACTA ATGCGGTCTT ACGTAAAGAC
TTGAAGAATA AGAATCTGAA GTTTGCCGAT AGCATGATAG CAATTTTTTT GGGAATAGTA
GTGGCGTCAT TAGTAGTTGC ATTAGCTCCA AGAGATATTC TCTGGCTATT TCTTTTGATC
TTTGCGTTGG CATATAACTT ATTACACTTA ATTGTCAGAA TTAAGGTTGA ACACGATGGG
ACAAATCGTG AATTATAG
|
|---|
| Protein sequence | MDDKRWIELA KRKKQDKYFG FISLLIVVMM VFFTVKNIGW LLIFIVVAVI LYFWIDVEQM
LEDSKVISRT QKIIFIVLGT IYELMSIIFV FVNLDFLLVA FGIVSAGYLG FKTNAVLRKD
LKNKNLKFAD SMIAIFLGIV VASLVVALAP RDILWLFLLI FALAYNLLHL IVRIKVEHDG
TNREL
|
|---|
| |