Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1863 |
Symbol | |
ID | 4438925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1853353 |
End bp | 1854030 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639673679 |
Product | deoxynucleoside kinase |
Protein accession | YP_819556 |
Protein GI | 116630403 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1428] Deoxynucleoside kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0000000000941818 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATGACAG TTATTGTATT AAGTGGGCCC ATTGGAGCCG GAAAATCCAG TCTAACAGGT ATTCTATCTA AGTATTTGGG TACTAATCCC TTTTACGAAA GCGTAGATGA TAATCCTGTT TTGCCATTAT TCTATGAAAA TCCTAAGAAG TACGCATTTT TATTGCAAGT TTATTTCTTG AATACTCGCT TCCAAAGTAT CAAGTCAGCA TTAACTGATG ATAATAACGT ACTCGATCGT TCTATCTACG AAGATGCACT TTTCTTTCAA ATGAACGCCG ATATTGGCCG TGCTACTAAA GAAGAAGTAG ATACTTATTA CGAACTTCTA CACAATATGA TGAGTGAGTT AGATCGGATG CCTAAGAAGA ATCCAGATCT TCTTGTTCAT ATTGATGTAT CATACGATAC AATGCTTAAA CGTATTCAAA AGCGTGGTCG TAACTATGAG CAATTAAGTT ATGACCCAAC TCTAGAAGAC TACTACAAGC GTTTGCTTCG CTATTATAAG CCTTGGTATG AAAAGTATGA TTATTCACCA AAGATGACTA TTGATGGTGA TAAATTCGAC TTCATGGCAA GTGAAGAAGA TCGTCAAGAA GTCTTGAACC AAATTGTTGC TAAGCTCAAA GAAATGGGCA AGCTTGACGA AGATTGGAAA CCAAATTTAG TTAAATAA
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Protein sequence | MMTVIVLSGP IGAGKSSLTG ILSKYLGTNP FYESVDDNPV LPLFYENPKK YAFLLQVYFL NTRFQSIKSA LTDDNNVLDR SIYEDALFFQ MNADIGRATK EEVDTYYELL HNMMSELDRM PKKNPDLLVH IDVSYDTMLK RIQKRGRNYE QLSYDPTLED YYKRLLRYYK PWYEKYDYSP KMTIDGDKFD FMASEEDRQE VLNQIVAKLK EMGKLDEDWK PNLVK
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