Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1862 |
Symbol | |
ID | 4439223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1852684 |
End bp | 1853334 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673678 |
Product | deoxynucleoside kinase |
Protein accession | YP_819555 |
Protein GI | 116630402 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1428] Deoxynucleoside kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0000000000853081 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATGACAG TTATTGTATT GAGCGGGCCT ATTGGAGCCG GAAAATCCAG TTTAACCAGT CTTCTTGCAG AGCATCTAGG CACCCAAGCA TTTTATGAAG GTGTAGATAA TAATCCAATT TTGCCACTTT ATTATAAAGA CATGGCACAT TACACCTTTC TTTTAAATAC TTATCTTCTA AACCACCGTT TGGCTCAAAT TAACCAAGCT ATTCGCGATC ATAACAGTGT GTCTGATCGT TCAATTTATG AAGATGCCTT ATTTTTCAAA ATGAATGTTG ACAGTGGAAT CGCAGATCCG ACTGAATTCA AGATCTACGA TAGTTTACTT GAGAATATGA TGGAACAAGC TCCAGGCAAC CCAAGTAAGA AACCTGATTT GTTAATTTAT ATTCATGTAT CTCTTGATAC CATGCTTCAC CGCATTCAAA AGCGCGGTCG TACATTTGAA CAATTATCAA CTGATCCAGG CTTAAAAGAC TACTATGCTC GACTTTTATC TTATTACGAG CCTTGGTATG AAAAATATAA TGCATCCCCT AAGATGATGA TTGACGGCGA TAAATATGAC TTTGTTGCAG ATGAAGAGGC ACGAAAAGAA GTTATCAGCA CAATTGATCA AAAGCTTACT GATCTAGGTA ATCTAAACTA G
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Protein sequence | MMTVIVLSGP IGAGKSSLTS LLAEHLGTQA FYEGVDNNPI LPLYYKDMAH YTFLLNTYLL NHRLAQINQA IRDHNSVSDR SIYEDALFFK MNVDSGIADP TEFKIYDSLL ENMMEQAPGN PSKKPDLLIY IHVSLDTMLH RIQKRGRTFE QLSTDPGLKD YYARLLSYYE PWYEKYNASP KMMIDGDKYD FVADEEARKE VISTIDQKLT DLGNLN
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