Gene LGAS_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1862 
Symbol 
ID4439223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1852684 
End bp1853334 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content37% 
IMG OID639673678 
Productdeoxynucleoside kinase 
Protein accessionYP_819555 
Protein GI116630402 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1428] Deoxynucleoside kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000000000853081 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATGACAG TTATTGTATT GAGCGGGCCT ATTGGAGCCG GAAAATCCAG TTTAACCAGT 
CTTCTTGCAG AGCATCTAGG CACCCAAGCA TTTTATGAAG GTGTAGATAA TAATCCAATT
TTGCCACTTT ATTATAAAGA CATGGCACAT TACACCTTTC TTTTAAATAC TTATCTTCTA
AACCACCGTT TGGCTCAAAT TAACCAAGCT ATTCGCGATC ATAACAGTGT GTCTGATCGT
TCAATTTATG AAGATGCCTT ATTTTTCAAA ATGAATGTTG ACAGTGGAAT CGCAGATCCG
ACTGAATTCA AGATCTACGA TAGTTTACTT GAGAATATGA TGGAACAAGC TCCAGGCAAC
CCAAGTAAGA AACCTGATTT GTTAATTTAT ATTCATGTAT CTCTTGATAC CATGCTTCAC
CGCATTCAAA AGCGCGGTCG TACATTTGAA CAATTATCAA CTGATCCAGG CTTAAAAGAC
TACTATGCTC GACTTTTATC TTATTACGAG CCTTGGTATG AAAAATATAA TGCATCCCCT
AAGATGATGA TTGACGGCGA TAAATATGAC TTTGTTGCAG ATGAAGAGGC ACGAAAAGAA
GTTATCAGCA CAATTGATCA AAAGCTTACT GATCTAGGTA ATCTAAACTA G
 
Protein sequence
MMTVIVLSGP IGAGKSSLTS LLAEHLGTQA FYEGVDNNPI LPLYYKDMAH YTFLLNTYLL 
NHRLAQINQA IRDHNSVSDR SIYEDALFFK MNVDSGIADP TEFKIYDSLL ENMMEQAPGN
PSKKPDLLIY IHVSLDTMLH RIQKRGRTFE QLSTDPGLKD YYARLLSYYE PWYEKYNASP
KMMIDGDKYD FVADEEARKE VISTIDQKLT DLGNLN