Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1859 |
Symbol | |
ID | 4439220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1850312 |
End bp | 1850722 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673675 |
Product | hypothetical protein |
Protein accession | YP_819552 |
Protein GI | 116630399 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000000135384 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00000000773634 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGCAGGATG GCGTGACAAA GATTATCATT AATTCACAAG TTTCAGCTGA AGGTCAGAGC GAAGATTTAA AAGCCTTGGC TAAATTAATG AACAATGAAC CTGTGAATTT AAATAAACAT TTTGATTACG CGCAAAGAAG AATTAAAGAA ATTAACGAAG ATCCAGAAAC GAGGGAAAAG ATCATACTTT ACGAAACGAG AATGCTAGAA CGTGAACAAG CTGCAGGAAA AGCTGGATAT GAACAAGGAA TGAGACATGG CGTTGAACAA GGAAAAGTGG ATTCTGCTAA AATTATTCTC GAAAATCAAT TGAATAATGG CAGAACTTTG GAACAAGCTA CGGAATTTGT GAAAAAATTG AAGCTGATTT CTGATAAAGA TCTCGAAAAA TTGATCAAAA TATATAAATA A
|
Protein sequence | MQDGVTKIII NSQVSAEGQS EDLKALAKLM NNEPVNLNKH FDYAQRRIKE INEDPETREK IILYETRMLE REQAAGKAGY EQGMRHGVEQ GKVDSAKIIL ENQLNNGRTL EQATEFVKKL KLISDKDLEK LIKIYK
|
| |