Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1854 |
Symbol | |
ID | 4439215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1845848 |
End bp | 1846642 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639673670 |
Product | esterase |
Protein accession | YP_819547 |
Protein GI | 116630394 |
COG category | [R] General function prediction only |
COG ID | [COG0627] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.118207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0000115459 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTACCA TAATAACATC CACACTTTAC TCTCCGCATT TAAAATTAGA TTGGAACTAT GATATCTATC TTCCAGATCA AGTTAATGTC CAGCAAAAGT ATCCATTGCT TTTAATGCTC CATGGATTAT ATGGAAATCA TACTAATTTT TTAGATACTA ATCGTATTGA CTCAAAAAAT ATCCTAGATA ACCTAATGCG CAATACCAAA AAGAAAATTA TCGTAGCTTT TGTAGACGGG TTTAATAGCT TCTACATCAA CTCTCCATAT GGTTTCAAAA TGGAAACAGC AATTATTCAG GACTTATTAC CCTATCTAAT TCAGCAGTAT CCTATCGCTA CCAAAATTGG TATTGGTGGC ATTTCAATGG GTGGATATGG TGCATCAAGA CTTGCTTTAA AATATCCTCA AATATTTTCG GCAGCGTTCT TAATTTCACC TGCTGTTTGG AATATTAAAC ATATTCCTCA TTTTATTCAT AATTCTATTC ATACATTTCA AGATGAACAA CATAGTTGGT CAGAAAATTT CTACAATAAA ATCTATCCGA CTACTTATTT ATCACCTATT TCAAATAAAA TTAATTTTTA TATTGAGAGT AGCAAAACAG ATAACGTTGT TCCTATCGAA GATGTAATAT GTTTTGCTCA AAAAGTTTCA AGCAACCAGA ATCGTGTTCA ACTAATAACT GATTCGTTTG GCGCCCACGA ATGGAGCTAT TGGCAAAAAG CAATAGTTCC AGCTTATATA TGGATGATCG ATCAATTAGA GCAGAAGAAA GGAGTGATAA ATTAA
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Protein sequence | MSTIITSTLY SPHLKLDWNY DIYLPDQVNV QQKYPLLLML HGLYGNHTNF LDTNRIDSKN ILDNLMRNTK KKIIVAFVDG FNSFYINSPY GFKMETAIIQ DLLPYLIQQY PIATKIGIGG ISMGGYGASR LALKYPQIFS AAFLISPAVW NIKHIPHFIH NSIHTFQDEQ HSWSENFYNK IYPTTYLSPI SNKINFYIES SKTDNVVPIE DVICFAQKVS SNQNRVQLIT DSFGAHEWSY WQKAIVPAYI WMIDQLEQKK GVIN
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