| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1851 |
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| Symbol | |
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| ID | 4439212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1842152 |
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| End bp | 1843636 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673667 |
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| Product | cellobiose-specific PTS system IIC component |
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| Protein accession | YP_819544 |
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| Protein GI | 116630391 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000119261 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00084927 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTTTCATA TATCGGGAGG TATTAATATG GCTAAGTTTA ATGCCGCAAA AATCACCTCT
AAAATGTCGA AACTAGCGGG TAATCGCTAT TTTGTGGCAA TTAGAGATGG GATGGCAGTT
ATTATTCCCG TAGCTATTGT CGGTTCATTC TTTACAATTA TTTCTCAATT TCCAATAGAT
AGTTGGAAAA AGTTTATTAC TCCATATTTA CCTGCATTGC AAGTACCAGT TACTTTTTCT
ATTGGTATGA TGGCCTTGTA TTCATGCTAT GCGATGGCTG CTGCATTGGC TGAGCACTAT
CAACTGGATA GAAATTCTTC AGCTACTGTT GCAACGATGG CATTCTTTAT ATTAGCTGTA
AGTCCAGGTA CTTTAACAGC TAAAGCAGCT AAATTATCTG GCATGTTAGC TGGAACAGTT
CTTCCTTCAA CCAATTTTGG TGCACAAGGT TTGTTTACTG CAATGTTAGT TTCAATGATA
TCAGTTGAAA TTATTCGTTG GTTTAAAGAG AAGAATTTAG TTATTAAGAT GCCGGATGGT
GTTCCACCTG CAGTTTCTAA TTCATTTGTT TCTTTGGTAC CAGCTTCAGT AATTATTATT
TTAGCTTGGG TAATTAAAGA AGTATTGCAT TTTGACTTGA ATGCAGGACT TTTGGCAATA
TTGTCACCAT TGTCTAACTT TGGTAAAGAT AACTTTATTT CATCAGTTAT TCCACCATTC
TTTAACTCAC TATTTTGGTT ATTTGGTATC CATGGTGCTA TTACTTCGAC TCCAATTTAT
CCATACTGGT ACAAGAACCT AGATGCAAAC ATGGCATCAA TTGCACATGG CGTGAGCGCT
GCTAATGCTC CAAGATTTAT GACTGAACAA TTCTTCCAAT GGTTTGTTTA TATTGGTGGT
TCAGGTACTA TCTTAGGTCT ATGTATTTTG TTAGCCTTTA TGTCTAAGTC TTCATTTGGT
AAGACCTTAG GTAAGGCAGT TATTATTCCA AGTATTTTCA ACATTAATGA ACCTATTATT
TTTGGTTTAC CAATTGTTTT AAACCCATAC TTTGCAATTC CATTTGTTGT AACACCTATG
GTAACTGGTG CTTTGACATA CTTTGCAATG GCTCTTCATT TAGTATCACG TACTATCGCT
TTGGTTCCAT GGACTTTACC AGGACCAATT GGGGCTTATA TGGCAACTGG ATTTGATTGG
CGTGCTGCTG TTTTATCTAT TATTAACGTC ATTATTTCTA TTGTTATTTA CTATCCATTC
TTTAAAGTTT GGGATAAGAA ACAACTAGAA AAGGAAGCTA AAGACAGCGC AAGTAAATCT
ACTAATACAG AAGCTTCAAA AGGTAATAAT GTTGAAGCAA TTAATTTAAC TGACAATAAT
TTATCGGTTG AATCTAGTTC TTTAAAAACA ACTATAAGCA CAAAGATAAT TGCACTTTTT
GATACGCTGA ATAAGTTTAA GAGATTAGCA AAAGAAAATG CTTAG
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| Protein sequence | MFHISGGINM AKFNAAKITS KMSKLAGNRY FVAIRDGMAV IIPVAIVGSF FTIISQFPID
SWKKFITPYL PALQVPVTFS IGMMALYSCY AMAAALAEHY QLDRNSSATV ATMAFFILAV
SPGTLTAKAA KLSGMLAGTV LPSTNFGAQG LFTAMLVSMI SVEIIRWFKE KNLVIKMPDG
VPPAVSNSFV SLVPASVIII LAWVIKEVLH FDLNAGLLAI LSPLSNFGKD NFISSVIPPF
FNSLFWLFGI HGAITSTPIY PYWYKNLDAN MASIAHGVSA ANAPRFMTEQ FFQWFVYIGG
SGTILGLCIL LAFMSKSSFG KTLGKAVIIP SIFNINEPII FGLPIVLNPY FAIPFVVTPM
VTGALTYFAM ALHLVSRTIA LVPWTLPGPI GAYMATGFDW RAAVLSIINV IISIVIYYPF
FKVWDKKQLE KEAKDSASKS TNTEASKGNN VEAINLTDNN LSVESSSLKT TISTKIIALF
DTLNKFKRLA KENA
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