| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1844 |
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| Symbol | |
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| ID | 4438958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1833531 |
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| End bp | 1835276 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639673660 |
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| Product | cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component |
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| Protein accession | YP_819537 |
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| Protein GI | 116630384 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.00355322 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAATA AAAAATTTTC TTGGAAAAAT GAACGGTGGG TAAAGCCCTA CCTAGCACAA
TATAAATGGA ATTTTATTCT AGCAATTTTT CTCGGCGTTG TGATGTTCTT TTGTGGTGGA
GCCTTGATGT TTTATGCCGG CTATACCATC GATAAAGCCG CTACGCGTCC AGAAAACATT
TTGATGATTT ATGTTCCTAT AGTTTTAATG AGAGCTGTTG GTATTGGACG GCCTTTATTT
AGATATTTAG AACGTCTGGT ATCCCACAAC TGGATTTTAC GCGTTACTAG TTCTTTGAGA
AGACGCCTCT TTTATATTGC TGAAAGAAAT ACCTCGGCTG TTGGCTCAAG TTTTCAAACA
GGCAGCATTT TATCACTGTT GACTGATGAT ATTGGACACT TGCAAAATCT TTATTTAAGA
ACTATTTTCC CGGCAATTTT AAGTTACTTA GTTGGCTTTA TCGTTGTAAT TTTATTGGGA
CTTTTTTCCT GGCCTCTAGC TGGAGTAATC GCAATTTTAT TAGTTGCGGA ATTAGTATTG
GTTCCCTTCT TTTCTCTTTT AAAGCAAGCT GCTGTTCGCA CTAAGGAAAA AGAAGAAAAA
GCGCAGCTTT ACACTGAATT TACTGATCAA GTTTTAGGCG CTGGTGACTG GAAAATTTCT
GGTAGACGGG ATGCTTTTTT CAATCAAACT AAAGGAACTT TAAAATCTTT AGGACAATAT
GAAAAGAAGT CTGGAAAATT TGATTGGGCT AGAGACTTTG GTCTTGAATT TATTTTTGGC
TTGATGGCAG TTGCCCTCCT TTATTTCACG AACCAAACTC TTACCAATAA TCAAGAAGCA
GCAAATTATG TTGGAGCAGT TGTCTTAGCT CTCTTTCCTT TATCAGATGC CTTTATTCCA
GTTGGACAAG GAATTGAAGA ATGGCATACA TATAGTGATT CTGTAAAACA CTTAAATGAA
TTAAAAGTAC CAGAGAACCG TTTACCTGCC CAACAATATT TTGATCCTGC TTTTGCTGGC
ACTTTAAGAG TTTCAAATAT TTCATTTACT TATCCTGGAG AAGACTATCC AATTATTCAA
AACTTTTCCC TTACCCTAAA AAGAGGACAA AAAGCGGCTT TAATTGGTCC ATCAGGTGCT
GGTAAAAGTA CTATCCTGCA ATTAATCTTA GGTGATTTAA AGCCTCGCCA AGGAACTGTT
ACGCTCGACC GCTTTAATGT TCTTGAACTT CAAAAAGAGC GTTCGAAGTT ATTTTCTGTA
TTAAATCAAG AGCCATTTTT ATTTAATACG ACGATCTATG AAAATTTAAA AATGGCCAAT
CCAGACGCTA GTGCTGATCA AATGATGCAA ATCTTAGAAA AAGTCCAATT AGCCGATTTT
GTTAATTCAC TCCCTAAGAA ATTAGATACC GAAGTAGCTG AAGCTGGAGC ACGCTTTTCT
GGTGGTCAGA AAGAGCGTTT AGCACTAGCA CGTGTACTTT TGCAAGATAC GCAAATTGTC
CTCTTAGACG AGCCAACAGT CGGCTTAGAT CCACTCACAG AGCAAAAGCT CTTAAATTTG
GTATTTGATG TCTTAAAAAA TAAGACAGTC GTTTGGGTAA CCCACCACTT ACAAGGTGTA
AAATATATGA ACGAAGTTCT CTTCTTTAAA GATGGAAAAG TCACAATGCA AGGAGATCCG
CATGAACTCT TTAAACACAA TGAACACTTC CACCAACTTT ATTTAATGGA TCAAGGACTA
ATCTAA
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| Protein sequence | MMNKKFSWKN ERWVKPYLAQ YKWNFILAIF LGVVMFFCGG ALMFYAGYTI DKAATRPENI
LMIYVPIVLM RAVGIGRPLF RYLERLVSHN WILRVTSSLR RRLFYIAERN TSAVGSSFQT
GSILSLLTDD IGHLQNLYLR TIFPAILSYL VGFIVVILLG LFSWPLAGVI AILLVAELVL
VPFFSLLKQA AVRTKEKEEK AQLYTEFTDQ VLGAGDWKIS GRRDAFFNQT KGTLKSLGQY
EKKSGKFDWA RDFGLEFIFG LMAVALLYFT NQTLTNNQEA ANYVGAVVLA LFPLSDAFIP
VGQGIEEWHT YSDSVKHLNE LKVPENRLPA QQYFDPAFAG TLRVSNISFT YPGEDYPIIQ
NFSLTLKRGQ KAALIGPSGA GKSTILQLIL GDLKPRQGTV TLDRFNVLEL QKERSKLFSV
LNQEPFLFNT TIYENLKMAN PDASADQMMQ ILEKVQLADF VNSLPKKLDT EVAEAGARFS
GGQKERLALA RVLLQDTQIV LLDEPTVGLD PLTEQKLLNL VFDVLKNKTV VWVTHHLQGV
KYMNEVLFFK DGKVTMQGDP HELFKHNEHF HQLYLMDQGL I
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