| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1843 |
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| Symbol | |
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| ID | 4438957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1831717 |
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| End bp | 1833534 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639673659 |
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| Product | cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component |
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| Protein accession | YP_819536 |
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| Protein GI | 116630383 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00685655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.00648796 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGATA AACGACTTTT CAAATTACCA AAAGCCAAAA TCATGCTCGC AATGCTTGCA
GGACTAATGT TCTTGCAAGC ATTTGCTATT TTAGGACAAG GTATTTTTCT TGCCCGAGCA
ATTGTTGGCT CTTGGAAACA GCAACCTTTT TCTGAAATTA CACAAGATGT GCTACTTTTT
TTGATTTTCT ATTTATTAAG ACAAGGTATC AACTGGTTTC AAAAATGGTA CATGAATCGT
TATGCAAATC AAACAACTAC CCTTTTGCGT CAACAACTAC TTAATAAAAC TTACGACGGG
GGAATTGCGC TAGTATCAAG AATTGGAACC GGGAATTTGG TTTCTACCCT GCTAGACGGA
ATGGATGAAA TTTCTAACTA TCTATCTTTA ATTTTTCCAA AATTAATTGC CCTTGCAATT
GTTCCTTGGG TTATTTTGAT TTATATTTTC ACCCTAAATG CTCTGTCAGG CTGGATTCTA
TTATTAGTAT TTCCTTTGCT GATCCTATTT ATGATAATTC TCGGAACAGC AGCTCAAAGC
AAGGCAAGTA AGCAATATGC TGGCTATGTT AAATTGCAAA ATCATTTTGT CGATGCCTTG
CGTGGCTTAA GCACTTTAAA AGTTTTGGGA CTTGCTAGAA AATATGGCAA TATTGTTTAC
AAAAACAGTG AAAACTATCG TAAAAAAACA ATGGGCGTTT TAAGAGTAGC TATCTTGTCT
ACTTTTACAC TTGATTTCTT TACAACCTTG TCAATTGCGA TGATTGCCAT GTTTCTTGGA
ATTGGCTTAA TCAACGGCAA TTTGGTTCTC TATCCTTCGC TGGTTATTTT GATCTTATCA
CCCGAATACT TTTTACCTAT TCGTGATTTT GGGAATGACT TTCATGCAAC ATTAAATGGT
AAAAATGCGC TTGGACAGAT TTTCGATATT TTAGCTTTTC CTACTACACC ACAAGAAGAT
CAGCTATCTA GTTTCACGTG GAACAAAGAT AGTACTTTTA TAGCTAAGAA TCTTGCTTTT
AACTATAGTC ATGTTGATCA AAGTGAGTTC ACTGTTAATA AAAATGCTAA AATGAGCGGC
GTCGTAAAAA AGAAATCGAA GCCTAAAGTA AACAAACATA CCGCTGATGA ATTACGTAAT
ATTAATTTAA GCCTTACTGG CTTTCAAAAA GTCGGCATTA TCGGCCCAAC TGGGGCTGGT
AAGACAACTT TAATGCGAAT CTTAGCTGGT TTTCTTACCC CGCACCTTAA AGATGATAAC
TTCACTATTA ATGGACAAAA TCTTGCTCAA CTTAATCAAA AAAGTTGGCA AAATCAAATT
ACTTATATTC CGCAGGATCC CTACATGTTT GCAAGCAGCA TCAGGGATAA TCTAACTTTC
TATAATCCGA ATGCCAGCCA AGAAGAGATT GACGCAGCTT TAAAGGCAAC TGACTTAGAT
AATTTTGTTG CCAGTTTAAA AGACGGTTTA AATACGCGAA TTGGTGAAAA TGGACGTGGT
ATTTCTGGTG GTCAAAAGCA GCGAATTGCT TTGGCACGTG CATTTTTGGC AAAAGACCGC
AAAATTCTAT TCTTTGATGA ACCAACTGCT CACCTTGATA TTGAAACTGA ATACGAATTA
AAGCAACCAA TGAAAAAACT AATGGAAAAT CATTTAGTCT TTTTTACAAC TCACCGTTTG
CACTGGCTAA ATGACATGGA CTGGTGCCTA GTTATTGAAA ATGGGGAAAT TGTTGAACAA
GGTACTCCTG ATGATCTAGC AAAAAACGGA ACTGTATTTA AGAAATTAAC TCAGCCACTG
AAAGAAGATC TACTATGA
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| Protein sequence | MIDKRLFKLP KAKIMLAMLA GLMFLQAFAI LGQGIFLARA IVGSWKQQPF SEITQDVLLF
LIFYLLRQGI NWFQKWYMNR YANQTTTLLR QQLLNKTYDG GIALVSRIGT GNLVSTLLDG
MDEISNYLSL IFPKLIALAI VPWVILIYIF TLNALSGWIL LLVFPLLILF MIILGTAAQS
KASKQYAGYV KLQNHFVDAL RGLSTLKVLG LARKYGNIVY KNSENYRKKT MGVLRVAILS
TFTLDFFTTL SIAMIAMFLG IGLINGNLVL YPSLVILILS PEYFLPIRDF GNDFHATLNG
KNALGQIFDI LAFPTTPQED QLSSFTWNKD STFIAKNLAF NYSHVDQSEF TVNKNAKMSG
VVKKKSKPKV NKHTADELRN INLSLTGFQK VGIIGPTGAG KTTLMRILAG FLTPHLKDDN
FTINGQNLAQ LNQKSWQNQI TYIPQDPYMF ASSIRDNLTF YNPNASQEEI DAALKATDLD
NFVASLKDGL NTRIGENGRG ISGGQKQRIA LARAFLAKDR KILFFDEPTA HLDIETEYEL
KQPMKKLMEN HLVFFTTHRL HWLNDMDWCL VIENGEIVEQ GTPDDLAKNG TVFKKLTQPL
KEDLL
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