| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1840 |
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| Symbol | |
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| ID | 4438954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1826772 |
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| End bp | 1829111 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673656 |
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| Product | peptide ABC transporter ATPase |
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| Protein accession | YP_819533 |
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| Protein GI | 116630380 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0302017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCAAC TTTTACACTT AAAAAAAACA TACCATGTCG GCGATACTGT AACGCATGCA
CTAGATGATG TTACTATTAA CTTTCGTAAC AGCGAATTTG TAGCAATTCT AGGCCCAAGT
GGTTCCGGAA AAACGACGCT TTTAAACGTA ATTGGTGGCT TAGACCATTA CGATTCTGGT
GATATTATCA TTAACGGTAA GTCCACCAAG AACTTTTCTC AAACCGACTG GGATGCTTAT
CGTAATAATT CTGTTGGCTT TATCTTTCAG AGCTATAACT TAATTTCTCA CCTGTCGATT
ATTGAAAACG TAGAATTAGG CATGACCCTT TCAGGCGTAA GCAGCAGTGA ACGTCATGAA
AAAGCTGTTT CTGCCTTAGA GCGCGTTGGT CTTGGTGATC ACTTAAAAAA GCATCCTAAT
CAATTATCTG GTGGACAGAT GCAACGTGTC GCTATTGCCC GGGCAATAGC TAATGATCCA
GATATTCTTT TATGCGACGA GCCAACTGGC GCTTTAGATA CTAAGACTAG TGAAAGTATC
ATGAAGCTAA TTAAAGAATT AAGTCATGAT AAGTTAGTCA TCATGGTAAC TCACAACCCA
GAATTGGCTG AAGAATATGC TAGTCGAATT GTTCATTTTC AAGATGGTAA AATTCTCAGT
GATTCAAATC CTTTTGAGCC AAAGAAAGAA GTAAAAGATA CTTTCAAACT CAAAAAGACC
AAAATGTCTT ACTGGAATGC TCTAAAATTA AGTTTTACTA ACATTATGAC TAAGAAGGGT
AGAACTTTTT TAACTGCATT TGCCTCAAGT ATTGGCATTA TTGGAATTGC AATTGTTCTT
GCCTTATCTC ATGGTTTTCA AAAGCAAATT AACGATACAC AAAGTAAAAC GCTAGCCAAG
TTTCCGATCT CTATTTCACA AACAGCGACC GATATGAACG CTGCCACAAA TCGAAATGAA
TCAGATAAAA ACGTCAAAAA TAAGGGCTAT TTAATTGCTT CAAAACCTGA CAACGAAAAA
AATACGCACG AAAATAAAAT TACCCAGTCT TACATTAACT ATGTTAAAAA GATTGATCCT
GATTATGCTA ACAATATTTC TTTCATTCGT GGCACCCAGC TCAATCTTTT GACTAATGAT
AATGGCAAAA TTAAGCATGT AGAATTTTCT AACGTTAACA ATTCAGGTTC AGCTATTGCT
AGTGCACAAC TTCAAGGAAT GAATAGTGTA GGTATCAATA CTAGCGTCTT TCCCAAAACA
CTTGATTCAA AGCAAGGAAC ATTTTTAAAA GATAATTACC AGATTCTTGC TGGATCATGG
CCTAAGTCAA ATAATGATGT AGTTCTCGTT TTAAATAATA AAAATCAGGC TAACATTAAC
GCACTTAAGA ACTTAGGTAT TTCAATTAAA GATGGTCAAA AGTTAGATCT TAATAAAATC
GTTGGTCGAA CTTTTAAAGT GATCAGTAAT AACGACTACT ATCAAGAACT ACCTACTGGA
AACTTTGTTC CGCAAAAAGC TTCTAAATCT ATGTATGATT CAAGCAACTT AACTTTGAAA
GTAACTGCAG TCATTCGTGG TAAAAATAAT AGCCAAATGG CTCTTTTAGA TAACGGTATT
GCTTACAGCG ATGGCTTGAC TCAAGAAATT ATTAAACAAA ATGAAAACTC CAAGATTGTT
AAGGCCCAAA AGAACAGTTC AACTAATGTT ATGACTAATC AGCCAATAAA CAAAACTCAA
AAAGAACAAT TCATTGCTTC TCTAGGTGGC TCTGGCATCC CGAGTGGTAT TCTCATTTAT
CCAAATTCCT TTAAGTCAAA AGATAAAGTA CTTGATTACT TAGACAAATA TAATAAGGGT
AAGTCGAAAA AAGACCAGAT TATTTATACT GATATGTCAG GTACCGTAAC TAAATTAACT
GGGGGCTTAC TAGACGGAAT CACCGATGTT TTAGTTGCCT TTGCTGGAAT TTCATTAGTA
ACCTCTATGA TTATGATCGG TATTTTGACT TATACTTCTG TTTTAGAGCG TACTAAAGAA
ATTGGCGTGT TAAAAGCACT TGGAGCTAGA AAACGCGACA TCACGCGCGT CTTTGATGCA
GAAACATTCA TTTTAGGATT ATTCTCTGGT ATTTTAGGTA TTTTCATTGC CTATTTATGT
ACTTTTCCAA TCAATGCTGT CTTATACGCA ATTACTAATA TGAGTAATGT GGCTCAGCTT
GATCCAATGC AAGCTCTAAT CTTAGTAATC ATTAGTACTA TCTTAACTAT GCTTGGCGGA
CATATTCCTG CTCGAATGGC AGCCAAAAAG GATGCCGCAA TCGCATTAAG AAGTGAATAA
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| Protein sequence | MLQLLHLKKT YHVGDTVTHA LDDVTINFRN SEFVAILGPS GSGKTTLLNV IGGLDHYDSG
DIIINGKSTK NFSQTDWDAY RNNSVGFIFQ SYNLISHLSI IENVELGMTL SGVSSSERHE
KAVSALERVG LGDHLKKHPN QLSGGQMQRV AIARAIANDP DILLCDEPTG ALDTKTSESI
MKLIKELSHD KLVIMVTHNP ELAEEYASRI VHFQDGKILS DSNPFEPKKE VKDTFKLKKT
KMSYWNALKL SFTNIMTKKG RTFLTAFASS IGIIGIAIVL ALSHGFQKQI NDTQSKTLAK
FPISISQTAT DMNAATNRNE SDKNVKNKGY LIASKPDNEK NTHENKITQS YINYVKKIDP
DYANNISFIR GTQLNLLTND NGKIKHVEFS NVNNSGSAIA SAQLQGMNSV GINTSVFPKT
LDSKQGTFLK DNYQILAGSW PKSNNDVVLV LNNKNQANIN ALKNLGISIK DGQKLDLNKI
VGRTFKVISN NDYYQELPTG NFVPQKASKS MYDSSNLTLK VTAVIRGKNN SQMALLDNGI
AYSDGLTQEI IKQNENSKIV KAQKNSSTNV MTNQPINKTQ KEQFIASLGG SGIPSGILIY
PNSFKSKDKV LDYLDKYNKG KSKKDQIIYT DMSGTVTKLT GGLLDGITDV LVAFAGISLV
TSMIMIGILT YTSVLERTKE IGVLKALGAR KRDITRVFDA ETFILGLFSG ILGIFIAYLC
TFPINAVLYA ITNMSNVAQL DPMQALILVI ISTILTMLGG HIPARMAAKK DAAIALRSE
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