Gene LGAS_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1838 
Symbol 
ID4438952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1824911 
End bp1825558 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content33% 
IMG OID639673654 
Productmetal-dependent membrane protease 
Protein accessionYP_819531 
Protein GI116630378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0506649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0616534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTT TTTTACGCTT TTTAGGAAAT TTAGCAATAA TTATTATCGC TTTTGTGTTT 
TATACCGTTT TGCAATTGGG ATATGCACAA AAAAAGGTGA ACTTATTATT TGCAATTATT
TTAGCCGTTT TAACAGTAGT AGCGATTTAC TGGATGTATT GGATTTATAA AAGAGAACTT
AAACAAGAAA ATGACTGGTT CTTTAATGCT AAACCACACT GGGATGCAAA AAGAATTATT
ATCGCAGTAG CTGCCTTTTT TGCGCTGGTA ATTTTTCAAG TGGCTTATAT TAGACTAATT
GGTGGCAATA CTATTTCTCA GAACCAAGCA GAACTTGATG AAGTTAGAAA AGTAGCATCC
CCAATGTTTA ATGTCTTGCT AGTTGTTGTA GCACCAATCT GTGAAGAGTT CATCTTCAGA
GCGCTGTTCT TCAACACTTT TTTCCCAGCA GATAATACTT TAAATAAGTG GGTTGGAATT
GTGGCAAGTG GCTTTGTTTT TGCTTATGGT CATGATCCAA TGTTTAGTAA ATTTATTTAC
CTATATTGGG TAATGGGAAT GATTCTGGCG TGGACGTATG TGGAAACAAA AGATATTAGA
TATTCGATTT TAACCCACAT GCTAAACAAT ATTCTGTCAA TTTTATAG
 
Protein sequence
MKTFLRFLGN LAIIIIAFVF YTVLQLGYAQ KKVNLLFAII LAVLTVVAIY WMYWIYKREL 
KQENDWFFNA KPHWDAKRII IAVAAFFALV IFQVAYIRLI GGNTISQNQA ELDEVRKVAS
PMFNVLLVVV APICEEFIFR ALFFNTFFPA DNTLNKWVGI VASGFVFAYG HDPMFSKFIY
LYWVMGMILA WTYVETKDIR YSILTHMLNN ILSIL