| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1836 |
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| Symbol | |
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| ID | 4438950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1822882 |
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| End bp | 1824336 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639673652 |
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| Product | galacitol PTS, EIIC |
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| Protein accession | YP_819529 |
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| Protein GI | 116630376 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000025524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.329345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAACA ATATTCATAC TTTCTTTAAC GCTTTTGGAG CAACCGTTAT TGTTCCTATT
ATGATCTTTA TTATTGCTTT ATTTCTAAAA GTAAAACCAA AAAAAGCAAT GATGTGTGGA
TTTTATGCTG GAGTAGGTTT AACCGGATTT TCTTGGATTA TTAACGAATT TACACCTGTA
GTTACGAAGA TTGTCCGTCA AATGGTCAAT AACACTGGCA TCAAATTACC CGTTGTTGAT
ATAGGCTGGC AGGCTGGTTC TCTTGCTAGT TTTGGTTCGC CGGTTGGCCT TACTTTTTTT
GTATTTGGCT TAATAGCAGA ATTTATTTTA TTTGCTGTTG GAGTAACCAA GGTGTTCATG
CCATCTAATC TTTGGAATAA TTTTGGTTTC ATGATTTGGG GGACTCTTGC TTTCTACGTA
ACTCATAATT GGTGGATTTC ACTAGGTTTA TCCTTTTTTA TGCTTCTTTA CACCTTACTA
TTAGCTGAAG TTCAGGCTGA CCGTTGGTCA AGTTATTATA AAATTGAAAA TACCACTGTC
TGTGCCGCAC AAAACATTGT TCAAACAGTC CCCGCTATTC TTTTAGATCC TTTGTGGGAT
TTGCTTGGTT TTAATAAAGC GAACTTAACA CCAGCAGCTT TTAAAGATAA GTTTGGCGTT
TTTGGCGAAC CAACAACATT AGGTGCTATT TTAGGAATAG TAATTGGTAT TTTAGGTAAT
ATTAAAGATC TAACAACCAT TAAGGCATGG GGACAAATTC TACAGTTTGC TGTTCAACTG
TCAGCTGTTA TGACAATCTT TCCTTTAGTT ACTAATGTAT TCAGTAAGGC TTTTACTCCT
CTAGCTAAGC AAATTGATAA AGAGAGGAAA CAAAGTAAGA ATCAAGATTC TGAGATAGAT
CCTATTCACG ATAAAAAGCG TTGGTTCCTA GCAGTTGATG ACGGTGTAGG TTATGGTGAG
TCAGCTACGA TTATTTCAGG AATTATCTTA ATCCCAATTA TGGTTGTTAT TGCCTTTCTT
TTACCAGGAA ACAAAACGCT TCCTGTCGTT GATTTAATTT CACTCCCATT TATGGTTGAA
TCAATTGTTG CTATCACTGA TGGTAATATC TTAAAGGTTA TTGCAAACGG GATTGTATGG
TTTAGCTTAG GTTTGTATGC AGCTAGCTGG CTAGGTTCAA TTTATACTGG AGCTATTTCT
CAGTATGGTG CGACAATTCC GGCTGGTATT GTATTAGTTA CTAGCTTTAA CTTAATGGCT
CGTCCCCTCA ATGCGTTAGT TTTTGCAGCT TTCATCTCAC AAAATCCTCT TTGGATTAGT
CTATGCATCA TTGTTTACTT GGCTTTGTTA TTCATTTTAA GAAAATATCG CCCACAAATT
TGGACTTACT TAAACAAAAT GGCCACTAAA AATGTTCACG CTAATCAAGA CCTTAAACCA
TCCCCTAAAG ACTGA
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| Protein sequence | MLNNIHTFFN AFGATVIVPI MIFIIALFLK VKPKKAMMCG FYAGVGLTGF SWIINEFTPV
VTKIVRQMVN NTGIKLPVVD IGWQAGSLAS FGSPVGLTFF VFGLIAEFIL FAVGVTKVFM
PSNLWNNFGF MIWGTLAFYV THNWWISLGL SFFMLLYTLL LAEVQADRWS SYYKIENTTV
CAAQNIVQTV PAILLDPLWD LLGFNKANLT PAAFKDKFGV FGEPTTLGAI LGIVIGILGN
IKDLTTIKAW GQILQFAVQL SAVMTIFPLV TNVFSKAFTP LAKQIDKERK QSKNQDSEID
PIHDKKRWFL AVDDGVGYGE SATIISGIIL IPIMVVIAFL LPGNKTLPVV DLISLPFMVE
SIVAITDGNI LKVIANGIVW FSLGLYAASW LGSIYTGAIS QYGATIPAGI VLVTSFNLMA
RPLNALVFAA FISQNPLWIS LCIIVYLALL FILRKYRPQI WTYLNKMATK NVHANQDLKP
SPKD
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