Gene LGAS_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1836 
Symbol 
ID4438950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1822882 
End bp1824336 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content36% 
IMG OID639673652 
Productgalacitol PTS, EIIC 
Protein accessionYP_819529 
Protein GI116630376 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3775] Phosphotransferase system, galactitol-specific IIC component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000025524 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.329345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAACA ATATTCATAC TTTCTTTAAC GCTTTTGGAG CAACCGTTAT TGTTCCTATT 
ATGATCTTTA TTATTGCTTT ATTTCTAAAA GTAAAACCAA AAAAAGCAAT GATGTGTGGA
TTTTATGCTG GAGTAGGTTT AACCGGATTT TCTTGGATTA TTAACGAATT TACACCTGTA
GTTACGAAGA TTGTCCGTCA AATGGTCAAT AACACTGGCA TCAAATTACC CGTTGTTGAT
ATAGGCTGGC AGGCTGGTTC TCTTGCTAGT TTTGGTTCGC CGGTTGGCCT TACTTTTTTT
GTATTTGGCT TAATAGCAGA ATTTATTTTA TTTGCTGTTG GAGTAACCAA GGTGTTCATG
CCATCTAATC TTTGGAATAA TTTTGGTTTC ATGATTTGGG GGACTCTTGC TTTCTACGTA
ACTCATAATT GGTGGATTTC ACTAGGTTTA TCCTTTTTTA TGCTTCTTTA CACCTTACTA
TTAGCTGAAG TTCAGGCTGA CCGTTGGTCA AGTTATTATA AAATTGAAAA TACCACTGTC
TGTGCCGCAC AAAACATTGT TCAAACAGTC CCCGCTATTC TTTTAGATCC TTTGTGGGAT
TTGCTTGGTT TTAATAAAGC GAACTTAACA CCAGCAGCTT TTAAAGATAA GTTTGGCGTT
TTTGGCGAAC CAACAACATT AGGTGCTATT TTAGGAATAG TAATTGGTAT TTTAGGTAAT
ATTAAAGATC TAACAACCAT TAAGGCATGG GGACAAATTC TACAGTTTGC TGTTCAACTG
TCAGCTGTTA TGACAATCTT TCCTTTAGTT ACTAATGTAT TCAGTAAGGC TTTTACTCCT
CTAGCTAAGC AAATTGATAA AGAGAGGAAA CAAAGTAAGA ATCAAGATTC TGAGATAGAT
CCTATTCACG ATAAAAAGCG TTGGTTCCTA GCAGTTGATG ACGGTGTAGG TTATGGTGAG
TCAGCTACGA TTATTTCAGG AATTATCTTA ATCCCAATTA TGGTTGTTAT TGCCTTTCTT
TTACCAGGAA ACAAAACGCT TCCTGTCGTT GATTTAATTT CACTCCCATT TATGGTTGAA
TCAATTGTTG CTATCACTGA TGGTAATATC TTAAAGGTTA TTGCAAACGG GATTGTATGG
TTTAGCTTAG GTTTGTATGC AGCTAGCTGG CTAGGTTCAA TTTATACTGG AGCTATTTCT
CAGTATGGTG CGACAATTCC GGCTGGTATT GTATTAGTTA CTAGCTTTAA CTTAATGGCT
CGTCCCCTCA ATGCGTTAGT TTTTGCAGCT TTCATCTCAC AAAATCCTCT TTGGATTAGT
CTATGCATCA TTGTTTACTT GGCTTTGTTA TTCATTTTAA GAAAATATCG CCCACAAATT
TGGACTTACT TAAACAAAAT GGCCACTAAA AATGTTCACG CTAATCAAGA CCTTAAACCA
TCCCCTAAAG ACTGA
 
Protein sequence
MLNNIHTFFN AFGATVIVPI MIFIIALFLK VKPKKAMMCG FYAGVGLTGF SWIINEFTPV 
VTKIVRQMVN NTGIKLPVVD IGWQAGSLAS FGSPVGLTFF VFGLIAEFIL FAVGVTKVFM
PSNLWNNFGF MIWGTLAFYV THNWWISLGL SFFMLLYTLL LAEVQADRWS SYYKIENTTV
CAAQNIVQTV PAILLDPLWD LLGFNKANLT PAAFKDKFGV FGEPTTLGAI LGIVIGILGN
IKDLTTIKAW GQILQFAVQL SAVMTIFPLV TNVFSKAFTP LAKQIDKERK QSKNQDSEID
PIHDKKRWFL AVDDGVGYGE SATIISGIIL IPIMVVIAFL LPGNKTLPVV DLISLPFMVE
SIVAITDGNI LKVIANGIVW FSLGLYAASW LGSIYTGAIS QYGATIPAGI VLVTSFNLMA
RPLNALVFAA FISQNPLWIS LCIIVYLALL FILRKYRPQI WTYLNKMATK NVHANQDLKP
SPKD