| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1830 |
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| Symbol | |
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| ID | 4438944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1816867 |
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| End bp | 1817742 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 639673646 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_819523 |
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| Protein GI | 116630370 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01716] transcriptional activator, Rgg/GadR/MutR family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000242153 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.270798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGAATG AAAAAATGTA TGGTCATGAA TTCAAAGAAT TACGCTTAGA ACAAGGTATT
ACGCAAAAAG AAGCCTGCCG TGGAATCTGC TCAGAATCAA AACTATCACG CTGGGAAAAT
GATCAAGTCG AGGTTGAATT TAGTACGGCA ATGAATTTAC TAAATAGAAT TCACATTACT
AGTCATGAAT TTATGGGTTG GTCCAAATTT TCACCACGGC CAGAAATAGA TCCTGAGCTT
TCTGAAGCTA TTGAAAAAGA AAATATTCCG TTTCTTAAAC GAGTTACACA AAAACAACTA
ACTAAGTATC ATAAAAATCA TAATAAGTTT GACTTATTTA TGGCCGCTAA TCTATGTAAT
CAACTTTTTA TCATCGAACA TAAAAATTAC TTGCCTCCTA TTGACCAAAA AAAGCTTTTT
GCAATTTTTT CAAAAGTCAA TTTATGGAGT CAATACTATA TTTCAGCATT TGGTGCATCA
ATTTTTCTAT TCAATCCTAA GCAAATTTAT GGTAGTTCAA TGCAAATCAT TCGTAATATT
GACCGTCTTA AAGAAGCTGA AACTAGTTTT AACTTAGAAA TCATTATGGG AAGTTTATCA
GATGGTATTT TACGGCTGAT TTCACTTAAT GAATTGTCTT ACGCTCAAAA ATTAGTCAAA
GAGCTTAAAA AAATCGAATT ACCACAATAT TTAATGTTTT TTACCCTAAC TTTGACCTAT
TTGCAAAAGG CAATTGATTA CATGAAAAAT AGTGATGACA AACCAATACT TACATTAATT
TCAGAAGTTT TAGATTTAGG ATGCAGTGTC CAAGCCACCA CCTACTTAGA TATGTTTAAG
TATTTAAAAG CTCAGCGAAA AAAATACAAT TTTTAA
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| Protein sequence | MENEKMYGHE FKELRLEQGI TQKEACRGIC SESKLSRWEN DQVEVEFSTA MNLLNRIHIT
SHEFMGWSKF SPRPEIDPEL SEAIEKENIP FLKRVTQKQL TKYHKNHNKF DLFMAANLCN
QLFIIEHKNY LPPIDQKKLF AIFSKVNLWS QYYISAFGAS IFLFNPKQIY GSSMQIIRNI
DRLKEAETSF NLEIIMGSLS DGILRLISLN ELSYAQKLVK ELKKIELPQY LMFFTLTLTY
LQKAIDYMKN SDDKPILTLI SEVLDLGCSV QATTYLDMFK YLKAQRKKYN F
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