| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1827 |
|---|
| Symbol | |
|---|
| ID | 4438976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1813822 |
|---|
| End bp | 1814982 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639673644 |
|---|
| Product | Kef-type K+ transport system, membrane component |
|---|
| Protein accession | YP_819521 |
|---|
| Protein GI | 116630368 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.136087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTTT TAGGAGAATT AATTTTAATT CTGCTGGCTA CTACATTATT AGGGCAACTG
TTTTCACGTC TTAATATGCC AGCGGTTATT GGTCAATTAT TATCAGGAAT TTTATTAGGT
CCAGCCATTT TAGGGCTAGT TAAACCAAAT GAAATTATTT CACTTTTTTC AGAGTTTGGT
GTAATTCTGT TGATGTTCTT AGCTGGTCTT GAAAGTGACT TAGACTTACT GAAAAAATAT
TTTAATCTAA GTTTCACTGT TGCTGGAATT GGCGTTATCT TGCCTGTCTT TTTCATGGGG
ATTGCAAGTT ACTTATTTGG AATGAACTTC CTTGAAGCCC TATTTATTGG AATCGTATTT
GCAGCTACTA GTGTTTCAAT TTCAGTTGTC GTATTGCAAG AAGCTAATCA AATTCATACT
CGAACTGGTA CAGCTATTTT AGGCGCAGCT GTGGTTGATG ATATCTTAGC AGTAATTGTA
TTAAGTTTAT TTACTACCTT TAGCCATGAA GGTGGTAAAA GTGGTTTAAC TAATAATTTC
TTTCTTAATT TATTAATTGA GGTAATCTAT TTCGTCGTTG TTTGGATTAT CTTCAAGTTC
ATTGCTCCAT ATTTTATGAA ACTAGCTGAA AAGATTGAAG TTGATTATGC TGTAGTTATT
GGCTCACTTG TACTTGCTTT ATCAATGGCT TGGGCAGCAG ATTTTGTAGG CTTAAGTGCG
GTTGTAGGAG CCTTTTTTGG CGGTCTTGCA ATCAGACAAA CTCCGCAATA TAAAGAAGTT
CAATCTTCAG TTAGCGCAAT CGGATATTCA ATTTTTATTC CAGTATTTTT TGTAAATATT
GGTCTCTCAA TGACATTCGC CAGCTTTATT AAAGATATTT GGTTTATCAT TGTAATGACA
ATTTTAGCTG TCGTGTCTAA GTTCTGGGCT GGTAAATATT CAAGTGAATT ATTTGGCTTT
ACTAAAAATG AAGGAAACAT TGTCGGTGCT GGGATGGTAT CACGTGGTGA AGTTGCTTTG
ATTGTTGCTC AAATCGGAAT TACGCACCAT CTCTTCCCAG AAGATATTTA CTCAAGTTTA
ATCTTGGTAA TTATTATCAC CACTGTCCTC TCACCATTTA TTTTGAACTA CTACATTAAG
CGTGGCGTAA AGAATAACTA A
|
|---|
| Protein sequence | MHFLGELILI LLATTLLGQL FSRLNMPAVI GQLLSGILLG PAILGLVKPN EIISLFSEFG
VILLMFLAGL ESDLDLLKKY FNLSFTVAGI GVILPVFFMG IASYLFGMNF LEALFIGIVF
AATSVSISVV VLQEANQIHT RTGTAILGAA VVDDILAVIV LSLFTTFSHE GGKSGLTNNF
FLNLLIEVIY FVVVWIIFKF IAPYFMKLAE KIEVDYAVVI GSLVLALSMA WAADFVGLSA
VVGAFFGGLA IRQTPQYKEV QSSVSAIGYS IFIPVFFVNI GLSMTFASFI KDIWFIIVMT
ILAVVSKFWA GKYSSELFGF TKNEGNIVGA GMVSRGEVAL IVAQIGITHH LFPEDIYSSL
ILVIIITTVL SPFILNYYIK RGVKNN
|
|---|
| |