Gene LGAS_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1818 
Symbol 
ID4438967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1806014 
End bp1807522 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content35% 
IMG OID639673635 
ProductD-alanine--poly(phosphoribitol) ligase subunit 1 
Protein accessionYP_815644 
Protein GI116630359 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain
[TIGR01734] D-alanine--poly(phosphoribitol) ligase, subunit 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000381678 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00010447 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTAAAG ATGTAATCAA GACAATCGAT CAAATTGCTA CTGAAGATCC AAACCGAATC 
GCCTATGATT ATCTTGGCGA AACTAATACT TATGGAGACT TGAAAGCTCG CTCAGATGCA
TATGCAGCTA AGATTAGCGA ATTAGATCTT CCTGAAAAAG CCCCAGTAAT GATTTGGGGT
GGTCAAACCT TTGAAATGAT TGCCAGTTTT CTTGGTGCTG TAAAAGCGGG ACATGCTTAT
ATTCCGATTG CTAGCTATTC TAATAGTGAA CGTTTGTTAA TGATTCAAGA GGTTTCTGAA
TCTCCATTGG TAATTGCAAT TGATAAGCTT CCAATTGAAA TGGAAAATAT CAAAGTTTTA
ACTCCTGAGG AAGTTTCTAA TAATCACACA GCGGTTGATC AAAGTAAATT TGTAAGTGGG
GATGATAACT TCTATATTAT CTTTACTTCA GGTACTACCG GTAAACCTAA AGGTGTGCAA
ATTAGTCATG ATAATTTACT GAGCTTTGTA AATTGGGAGT TAAATGACTT TTCACTTCCA
GATCAACCTA GTTTTTTAGC ACAAGCTCCG TATTCTTTTG ACTTATCTGT TATGAGCCTA
TATCCTGCTT TAACTGCAGG CGGCAAGCTA GTAGTATTAC CTCATGATGT AACTGAGAAT
TTAGGTCAGT TATTTAAGAC TTTGCCACAA TTAAAATTTA ACGTTTGGGT TTCAACACCA
TCATTTGTAG AGATGAGCTT TTTGGATCCA ACTTTTGATG CAAAGCACCA TCCGGAATTA
ACACATTTTC TATTCTGCGG TGAAGAATTA AGTCATAAGA CAGCTAAAAT GCTTAAGATG
AAATTCCCAG ATAGCCATAT TTTCAACACT TACGGTCCTA CAGAAACAAC TGTTGCTGTT
ACTCAAGTAG AAATTACTGA TGATGTTTTG AATAAGTATG ATCGATTACC AATTGGGGTT
TCTAAAGAAG ATACTAAAAT TTCAATTGAT ACTTCAAAAG GTGAAGAAAA GGATCAAGGC
GAAGTTATTA TTGAAGGACC TAGTGTTTCA AAAGGATATT TAAATAATCC AGAAAAGACT
AAGGCTGCTT TCTTTAAAGA TAGAGAGCAT GCAAGTTACC GTACTGGGGA CTTAGGATTT
TTAGATGGCA ATATGCTCTT TTATCGCGGA AGAATTGATT TCCAAGTTAA GTTCAATGGT
TACCGAATTG AGCTAGAAGA AATTAACTTC TATCTTGCTA AGAATCCATT AGTACGTTAT
GGCGTTGTTG CTCCTAAATA CAATAAAGAA CATAAGGTTC AACAATTAGT GGCTGTAGTT
GAATTAGCTG ATGGAGTACG AGAAAAGTAC GATGATGCTG AATTGACTAA AAAGTTACGT
GAGTCTTTAA GTCAAGATAT TATGCCATAC ATGCTTCCTC AACGCTTTAT CTACCGTGAT
GAAATGCCAA TTTCTCAAAA CGGTAAGGTA GATATTAAAC AAGTAATTAA GGAGGTAAAT
AACGCGTGA
 
Protein sequence
MIKDVIKTID QIATEDPNRI AYDYLGETNT YGDLKARSDA YAAKISELDL PEKAPVMIWG 
GQTFEMIASF LGAVKAGHAY IPIASYSNSE RLLMIQEVSE SPLVIAIDKL PIEMENIKVL
TPEEVSNNHT AVDQSKFVSG DDNFYIIFTS GTTGKPKGVQ ISHDNLLSFV NWELNDFSLP
DQPSFLAQAP YSFDLSVMSL YPALTAGGKL VVLPHDVTEN LGQLFKTLPQ LKFNVWVSTP
SFVEMSFLDP TFDAKHHPEL THFLFCGEEL SHKTAKMLKM KFPDSHIFNT YGPTETTVAV
TQVEITDDVL NKYDRLPIGV SKEDTKISID TSKGEEKDQG EVIIEGPSVS KGYLNNPEKT
KAAFFKDREH ASYRTGDLGF LDGNMLFYRG RIDFQVKFNG YRIELEEINF YLAKNPLVRY
GVVAPKYNKE HKVQQLVAVV ELADGVREKY DDAELTKKLR ESLSQDIMPY MLPQRFIYRD
EMPISQNGKV DIKQVIKEVN NA