Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1818 |
Symbol | |
ID | 4438967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1806014 |
End bp | 1807522 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639673635 |
Product | D-alanine--poly(phosphoribitol) ligase subunit 1 |
Protein accession | YP_815644 |
Protein GI | 116630359 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
TIGRFAM ID | [TIGR01733] amino acid adenylation domain [TIGR01734] D-alanine--poly(phosphoribitol) ligase, subunit 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000381678 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00010447 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTAAAG ATGTAATCAA GACAATCGAT CAAATTGCTA CTGAAGATCC AAACCGAATC GCCTATGATT ATCTTGGCGA AACTAATACT TATGGAGACT TGAAAGCTCG CTCAGATGCA TATGCAGCTA AGATTAGCGA ATTAGATCTT CCTGAAAAAG CCCCAGTAAT GATTTGGGGT GGTCAAACCT TTGAAATGAT TGCCAGTTTT CTTGGTGCTG TAAAAGCGGG ACATGCTTAT ATTCCGATTG CTAGCTATTC TAATAGTGAA CGTTTGTTAA TGATTCAAGA GGTTTCTGAA TCTCCATTGG TAATTGCAAT TGATAAGCTT CCAATTGAAA TGGAAAATAT CAAAGTTTTA ACTCCTGAGG AAGTTTCTAA TAATCACACA GCGGTTGATC AAAGTAAATT TGTAAGTGGG GATGATAACT TCTATATTAT CTTTACTTCA GGTACTACCG GTAAACCTAA AGGTGTGCAA ATTAGTCATG ATAATTTACT GAGCTTTGTA AATTGGGAGT TAAATGACTT TTCACTTCCA GATCAACCTA GTTTTTTAGC ACAAGCTCCG TATTCTTTTG ACTTATCTGT TATGAGCCTA TATCCTGCTT TAACTGCAGG CGGCAAGCTA GTAGTATTAC CTCATGATGT AACTGAGAAT TTAGGTCAGT TATTTAAGAC TTTGCCACAA TTAAAATTTA ACGTTTGGGT TTCAACACCA TCATTTGTAG AGATGAGCTT TTTGGATCCA ACTTTTGATG CAAAGCACCA TCCGGAATTA ACACATTTTC TATTCTGCGG TGAAGAATTA AGTCATAAGA CAGCTAAAAT GCTTAAGATG AAATTCCCAG ATAGCCATAT TTTCAACACT TACGGTCCTA CAGAAACAAC TGTTGCTGTT ACTCAAGTAG AAATTACTGA TGATGTTTTG AATAAGTATG ATCGATTACC AATTGGGGTT TCTAAAGAAG ATACTAAAAT TTCAATTGAT ACTTCAAAAG GTGAAGAAAA GGATCAAGGC GAAGTTATTA TTGAAGGACC TAGTGTTTCA AAAGGATATT TAAATAATCC AGAAAAGACT AAGGCTGCTT TCTTTAAAGA TAGAGAGCAT GCAAGTTACC GTACTGGGGA CTTAGGATTT TTAGATGGCA ATATGCTCTT TTATCGCGGA AGAATTGATT TCCAAGTTAA GTTCAATGGT TACCGAATTG AGCTAGAAGA AATTAACTTC TATCTTGCTA AGAATCCATT AGTACGTTAT GGCGTTGTTG CTCCTAAATA CAATAAAGAA CATAAGGTTC AACAATTAGT GGCTGTAGTT GAATTAGCTG ATGGAGTACG AGAAAAGTAC GATGATGCTG AATTGACTAA AAAGTTACGT GAGTCTTTAA GTCAAGATAT TATGCCATAC ATGCTTCCTC AACGCTTTAT CTACCGTGAT GAAATGCCAA TTTCTCAAAA CGGTAAGGTA GATATTAAAC AAGTAATTAA GGAGGTAAAT AACGCGTGA
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Protein sequence | MIKDVIKTID QIATEDPNRI AYDYLGETNT YGDLKARSDA YAAKISELDL PEKAPVMIWG GQTFEMIASF LGAVKAGHAY IPIASYSNSE RLLMIQEVSE SPLVIAIDKL PIEMENIKVL TPEEVSNNHT AVDQSKFVSG DDNFYIIFTS GTTGKPKGVQ ISHDNLLSFV NWELNDFSLP DQPSFLAQAP YSFDLSVMSL YPALTAGGKL VVLPHDVTEN LGQLFKTLPQ LKFNVWVSTP SFVEMSFLDP TFDAKHHPEL THFLFCGEEL SHKTAKMLKM KFPDSHIFNT YGPTETTVAV TQVEITDDVL NKYDRLPIGV SKEDTKISID TSKGEEKDQG EVIIEGPSVS KGYLNNPEKT KAAFFKDREH ASYRTGDLGF LDGNMLFYRG RIDFQVKFNG YRIELEEINF YLAKNPLVRY GVVAPKYNKE HKVQQLVAVV ELADGVREKY DDAELTKKLR ESLSQDIMPY MLPQRFIYRD EMPISQNGKV DIKQVIKEVN NA
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