| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1813 |
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| Symbol | |
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| ID | 4438962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1800788 |
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| End bp | 1802038 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673630 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_815635 |
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| Protein GI | 116630354 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000665519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0000000329219 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTCAGCTT CTTTTTATAC GATAAATCTT AATTTAAAAG GAGGAACACA CATGTTAAAA
AAGCATGCGC TAGACCCTAT TAAGTTAATT TGGCTATTTG CTGGTTCTCT AATCATCAAT
ACTGGCGTTA GTTTTATTTG GCCACTAACT ACAATTTATA TTCACAATTA TCTTCACGAA
ACGCTCACTA TAGCTGGGAT TGTATTATTT ATTAACTCCG CTTTTACAAT GGTAGGAAAT
GCACTAGGTG GTTTTTTATT TGATAAGTGG CATCCATATC AAACACTTTT AACTGGCGTA
AGCATTTCTA CATTATCCAC TTTCTTATTG GTCCTCTTTC ATGGCTGGCC AGCCTATCCA
ATCTTGTTAA TTACTTTAGG GTTAGGTAAT GGGATCGTAG TTACTGGTTT AAATTCTATT
GCGACTCTAA TTAGGAGTCG AAATGCTTCT TATGTTTTTA ACGTTTTATA TTTCACACAA
AACTTGGGAC TAGTCTTTGG CTCGTTAATG GTTGGATTTA TTTTACCCTT CGGCATTACT
TATATTTTCC TACTTGCCTT TATTATGTTT GCATTTTTAA GTATCGTAGT CTTTCTTGAA
TATCGCGGTT TAAATCAGGC TCATGCTGCT AAAGGTAAAA AAGTAGCTGA ATCAGAATAT
CAAGAACAGA TTCCCTATGG TGCAAAAAAA GCTATTTTTT CTATCTTAGT TTGTGTTCTA
GCAGCTTGGA TTGCATATGA ACAATGGAAC TCAAACATTT CTTCCTACAT GTTAGGCTTA
CATATGAGTG TACGTTTATA CAGTTTGCTT TGGACTTTAA ATGCTGTTTT AATCGTACTC
ATTCAGCCTC TTTTAACTTA CTTCGACGAT TGGCTAACCC AGCACTTACA CGGTCGTTTA
TATATTGGTT TCAGTTTATT TGGATTAGCT TTCTTATTGC TAATCGGGGC AAGTCACTAT
TTTAGCTTTG TCTTAGCTAT GGCTGTCCTG ACTTGTGGTG AAATTTTAGC CTTTCCTGCT
GTTTCCACTT TCGTTAATGA TCGGGCCACT AATAAAGATA AGGGAAAATA TCAAGGAATT
GTTCAATCAA TTACTTCAGC TGGTCGTGCT TTAGGGCCAC TAATTGGTGC CTTAGTAATC
GATAATTTTT CCTACTTGGT TTTATTTATC TTTTGTACCA TTTTAGTTTT AATTTCCGTT
CTTCTATTTG CACTGATTAA TGCTTATAAC AAGAAAAAGA TCGCTAAATA G
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| Protein sequence | MSASFYTINL NLKGGTHMLK KHALDPIKLI WLFAGSLIIN TGVSFIWPLT TIYIHNYLHE
TLTIAGIVLF INSAFTMVGN ALGGFLFDKW HPYQTLLTGV SISTLSTFLL VLFHGWPAYP
ILLITLGLGN GIVVTGLNSI ATLIRSRNAS YVFNVLYFTQ NLGLVFGSLM VGFILPFGIT
YIFLLAFIMF AFLSIVVFLE YRGLNQAHAA KGKKVAESEY QEQIPYGAKK AIFSILVCVL
AAWIAYEQWN SNISSYMLGL HMSVRLYSLL WTLNAVLIVL IQPLLTYFDD WLTQHLHGRL
YIGFSLFGLA FLLLIGASHY FSFVLAMAVL TCGEILAFPA VSTFVNDRAT NKDKGKYQGI
VQSITSAGRA LGPLIGALVI DNFSYLVLFI FCTILVLISV LLFALINAYN KKKIAK
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