| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1790 |
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| Symbol | |
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| ID | 4438989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1776730 |
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| End bp | 1778121 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639673607 |
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| Product | amino acid transporter |
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| Protein accession | YP_815615 |
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| Protein GI | 116630343 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000013826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 2.2077400000000002e-24 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGTTGA TGGAAAATAA GAAAAATCAT CCTCCTAAAT TAAAAAGATC CATGACTGCA
GGCCAAATGG AAATGATTTC TCTCGGCGGG GCAATTGGTG TAGGCTTGTT CATGGGATCC
ACCTCTACAA TAAAATGGAC AGGACCTTCA GTTTTATTAG CGTATATGTT TGTTGAATTG
ATTTTATATA TTGTAATGCG GGCACTTGGT GAGATGCTCT ATGTTAGTCC TGGAACTGGT
TCATTTGCTG ATTATGCTAC AGAATATATT TCTCCTCTAG CAGGATATTT GGCAGAATGG
GCTAACGTTT TTCAGTACAT TGTCGTTGGC ATTTCTGAAG TTGTTGCTGC TACAGAATAC
TTAAAATTCT GGTGGCCTCA AGTTAATGTG TTTTGGTCAG GAATCATTAT TATTGCACTT
TTACTATTAG CAAACTTAGC TAGTGCTAAA GCATATGGGG CTCTAGAATT TTGGTTTGCA
ATGATTAAAG TAGTAACAAT TATACTAATG ATTATTTTGG GATTGTTTGT AATTTTACTT
GGTGTAGGTA ATCATGGAAA ACCACTCGGT TTTAGCAACT TATGGTCGCA TAGTGGATTC
TTTACAGGTG GAGTAAAAGG ATTCTTCTTT TCAATGGCAA TTATTGCAGG TTCTTATGAA
GGAATAGAGT TAATTGGTAT TTCAGCTGGA GAAGTTGCTA ATCCACAAGA AGCAATCGTA
AAAAGTGTAA AGTCTGTTTT ATGGCGTATA TTGATTTTCT ATGTTGGAGC GATTTTTGTT
ATTGTTACCA TTTATCCATG GAATCAGCTA AGTAATATTG GTTCACCATT TGTAGAAACT
TTTACTAAGG TAGGAATTAC AGCCGCGGCA GGTATTATCA ACTTTGTTGT ATTAACAGCA
GCCTTATCGG GTGCAAATTC TGGAATCTAT TCTTCGAGTA GAATGCTATT TAAATTGTCT
CATGAAGGAG AAGCGCCAAA GATATTTGGT AAGCTATCGA AGCATATTGT TCCTGATCGT
GCAATTATTG GTATTACTGT TGGCATTTTG GTCGGTTTCG TTTTAAACTT GATTGTTTCA
ACAATGAATA AATCAATGGG AGAGCTATTT GTCATTGTCT ATAGTTCCTC TGTTTTGCCA
GGGATGGTGG CATGGTTTGT AATTTTGATT GCTGAATTAA AATTTAGAAA AAGCAACACT
CATTTGATGG ATAAGCATCC GTTTAAGCTA CCGTTATACC CATATTCAAA TTATTTTGCT
TTTATGATGT TGCTAATAAT CGTGATTTTT ATGTTTATTA ATCCAGAAAC TAGAGTTTCT
GTTACTGTAG GCGCAGGTGT CCTAGTATTA GCAGCAATTG TGTATGCAAT TAAGCACCGC
AAGAAAAAAT AA
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| Protein sequence | MVLMENKKNH PPKLKRSMTA GQMEMISLGG AIGVGLFMGS TSTIKWTGPS VLLAYMFVEL
ILYIVMRALG EMLYVSPGTG SFADYATEYI SPLAGYLAEW ANVFQYIVVG ISEVVAATEY
LKFWWPQVNV FWSGIIIIAL LLLANLASAK AYGALEFWFA MIKVVTIILM IILGLFVILL
GVGNHGKPLG FSNLWSHSGF FTGGVKGFFF SMAIIAGSYE GIELIGISAG EVANPQEAIV
KSVKSVLWRI LIFYVGAIFV IVTIYPWNQL SNIGSPFVET FTKVGITAAA GIINFVVLTA
ALSGANSGIY SSSRMLFKLS HEGEAPKIFG KLSKHIVPDR AIIGITVGIL VGFVLNLIVS
TMNKSMGELF VIVYSSSVLP GMVAWFVILI AELKFRKSNT HLMDKHPFKL PLYPYSNYFA
FMMLLIIVIF MFINPETRVS VTVGAGVLVL AAIVYAIKHR KKK
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