| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1788 |
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| Symbol | |
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| ID | 4438987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1774423 |
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| End bp | 1775823 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639673605 |
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| Product | amino acid transporter |
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| Protein accession | YP_815611 |
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| Protein GI | 116630341 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000134575 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 3.757e-23 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGAGA ATGAAACAAG TAAATTAGGC TTTTGGTCGA TTGTTCTTTT AGCCATTAAT
TCGATTATTG GTTCAGGAAT ATTCTTGACA CCAGGTAGTG TTGTTCAACA GGCTGGTTCA
AAAGCATTAA TTGTGTACTT TATAGCTGCA ATTTTTGCTT CTATTTTAGC TATTTCTTTT
GCAGCAGCTG CAAAATATGT AACTAAATCT GGTGCTGCTT ATGCGTATTC AAAGGCAGCT
TTCGGAAATA ATGTAGGTTT CTATATGGGG ATTTTACGTT ACTTTTCTGC AAGTGTAGCT
TGGGGCGTTA TGGCAGTTGG GGTTATCAAA TCAACAATTT CTATTTTTGG CGGTAATCCA
AATAAAACGA TGAGTGTGAC TATCGGCTTT TTGATTTTAA TGGCTGTTAT TACGATTATT
AACTTATTTG GTCAAAAGGT TGTTAAGTAT GTCATGAATT TAGCAACAAT TGGTAAGTTA
GCTGCCTTAG TATTAATTAT TGTTGCTGGA GTAGTCTTGT TAATTATGAC TGGTGCTTCA
AGTAACCTAA ATGAAGTAGA TCAAATTACT CAAAATGGTC AAAAGATTGT ACCAACTTTA
ACTACTACAG GTTTTGTAAT GGCAATTGTA TCAGCATTTT ATGCCTTTAC TGGATTTGAA
TCAGTTGCTT CGGGTTCAGA TGATATGAAA AATCCAGCTA AGAACTTGCC ACGTGCTATT
CCTTTAGCAA TTATTGTAAT TGCAATAGTT TATATTGGCG TTGTTGCAGT TGCGATGATG
CTTGATCCTA AGTCGTTGAT GACAACTAAG CAGGTTGTAG CGATTGCAGC AATTTTTAAA
AATGAAATTT TAAGGGATGT TATTCTAGTA GGTGCTTTAA TTTCAATGTT TGGTATTAAT
GTTGCTTCAA GCTTTAACGC ACCAAGAATT TTAGAAGCTA TGGCACGTGA AAATCAATTC
TCGAAGAGTC TGACTAAGAG AACCAAAAAT AATTTTCCAA TTAGAACGTT CTTTATTTCA
GTATTACTTG CAATTTTAAT TCCAATGGCA TTTGAATATA ACATGGTTAA CTTGATTACA
TTAAGTGCTA TGGTACGTTT TCTAGGTTTC ATTGTAGTTC CGTTAGCAGT TATCCAATTT
TATCGTGGAA AGACTGCAGA AACTGTCTTA AATGCCCAGA AGAACATATG GACTGATATT
GTTGTTCCAA TTCTTTCAAT TGTCTTGGTT ATCTTCCTAT TAGTCGAATA TAACTGGAAA
GCACAATTTG GTGTGGTTAA TGCAAGTGGA CAAGTAACTG GAATTAATTG GTATGCAATA
GCAATGATGA TTTTTGGATT TATTGTTTTA CCACTAATTA TGTTCTTTAT CTCTAGAAAA
GATCGTAAGG CTAGTAAATA A
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| Protein sequence | MNENETSKLG FWSIVLLAIN SIIGSGIFLT PGSVVQQAGS KALIVYFIAA IFASILAISF
AAAAKYVTKS GAAYAYSKAA FGNNVGFYMG ILRYFSASVA WGVMAVGVIK STISIFGGNP
NKTMSVTIGF LILMAVITII NLFGQKVVKY VMNLATIGKL AALVLIIVAG VVLLIMTGAS
SNLNEVDQIT QNGQKIVPTL TTTGFVMAIV SAFYAFTGFE SVASGSDDMK NPAKNLPRAI
PLAIIVIAIV YIGVVAVAMM LDPKSLMTTK QVVAIAAIFK NEILRDVILV GALISMFGIN
VASSFNAPRI LEAMARENQF SKSLTKRTKN NFPIRTFFIS VLLAILIPMA FEYNMVNLIT
LSAMVRFLGF IVVPLAVIQF YRGKTAETVL NAQKNIWTDI VVPILSIVLV IFLLVEYNWK
AQFGVVNASG QVTGINWYAI AMMIFGFIVL PLIMFFISRK DRKASK
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