| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1786 |
|---|
| Symbol | |
|---|
| ID | 4439016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1772021 |
|---|
| End bp | 1773082 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639673603 |
|---|
| Product | asparagine synthetase AsnA |
|---|
| Protein accession | YP_815606 |
|---|
| Protein GI | 116630339 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2502] Asparagine synthetase A |
|---|
| TIGRFAM ID | [TIGR00669] aspartate--ammonia ligase, AsnA-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00000156633 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 2.77928e-18 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGGCT TTTTCTTTAC CCTTAATATT TTTTCTAAGG AGTACATAAT TATGACATTG
ATATTACCTA AGGACTACCA ACCCAGTCTA ACCATTCGTG ATACTGAAGC CGCAATTGTT
TTCATTAGAG AAACTTTTCA AGATAAAATT GCTGAAAAAC TAAATGTTCA ACGAATGTCG
GCACCAATGT TTGTTGAAAA GTCTACTGGA TTAAACGACA ACTTAAATGG TGTTGAACGT
CCTGTTTCTT TTGATATGAA AGCTATGCCT AACGATACAA TTGAAGTAGT TCATTCACTA
GCCAAATGGA AACGTCTGGC ACTTAAGCGC TACGGATTTG GAATGCATGA AGGTCTCTAC
ACTAATATGA ATGCTATTAG ACGTGACGAA GACTTAGATA ATTTCCATTC AATTTACGTA
GACCAGTGGG ATTGGGAAAA AATCATTTCC AAAGATGAAC GTAATATCGA TACCTTAAAA
GATACTGTTA AGCAAATCTT TAAAGCAATC AAAGAGACAG AAAAAGAAGT TGCAGCCCGC
TACCCTAGTT CTACTTATCG TTTACCTAAC GAAATTACAT TTATTACTAC ACAAGAACTC
GAAGACCGCT GGCCTGATTT AACACCTGAT GAGCGTGAAG ATAAAATTGC TAAAGAGAAA
AAAGCTGTAT TTTTAATGAA GATTGGGGAT AAGCTAAAAC GTAGTGGTAA GCCACATGAT
GGTCGCGCAC CAGACTACGA TGATTGGCAA TTAAATGGTG ACCTTTTATT TTGGTATGAA
CCTTTACAAC GTAAATTAGA AATCTCTTCA ATGGGAATTC GTGTCAGTGA AGAATCACTA
AAAACGCAGC TAAAAAAAGC CCATGCCGAG GAAAGAGCAG CTTTGCCATT TCATAAAATG
CTTTTAAACG GAGAGCTTCC TTATACAATT GGCGGAGGAA TTGGACAATC TCGTTTGTGC
ATGCTTTTAC TTGGAAAAGC CCATATTGGG GAAGTTCAAG CTAGCATCTG GCCTCCAAAA
ATGATTGAAG AATGTGAAGC AGCTGGGATG CAAATGCTAT AA
|
|---|
| Protein sequence | MKGFFFTLNI FSKEYIIMTL ILPKDYQPSL TIRDTEAAIV FIRETFQDKI AEKLNVQRMS
APMFVEKSTG LNDNLNGVER PVSFDMKAMP NDTIEVVHSL AKWKRLALKR YGFGMHEGLY
TNMNAIRRDE DLDNFHSIYV DQWDWEKIIS KDERNIDTLK DTVKQIFKAI KETEKEVAAR
YPSSTYRLPN EITFITTQEL EDRWPDLTPD EREDKIAKEK KAVFLMKIGD KLKRSGKPHD
GRAPDYDDWQ LNGDLLFWYE PLQRKLEISS MGIRVSEESL KTQLKKAHAE ERAALPFHKM
LLNGELPYTI GGGIGQSRLC MLLLGKAHIG EVQASIWPPK MIEECEAAGM QML
|
|---|
| |