Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1780 |
Symbol | |
ID | 4439010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1765727 |
End bp | 1766719 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639673597 |
Product | sucrose operon repressor |
Protein accession | YP_815597 |
Protein GI | 116630333 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.000000000248781 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAATGG TTAAATTAAC CGACGTAGCT GCTAAAGCAG GCTGTTCTGT AACTACCGTT TCACGAGTAA TTAATAATTA TGGCTATATT AGTCAAAAAA CAAGAAAAAA AGTTCACGAA GCAATGAGAG AGCTGAATTA TCAGCCAAAT TCTGTTGCCC GCTCTCTTCA AGGAAAGAAA ACCAAGCTTA TTGGTTTAAT TTTTCCAGAT GTATCTAATC CATTTTTTGG TGAATTAGTT TCTAAAATTG AAGACCAATT ATTTAATCAC GGCTACAAAA CAATTCTTTG CAATGCTGGC AATGATACAG AGAAGGAACG GACCTATTTG CAAATGCTCA TGGCTAATCA GGTAGATGGG ATTATTGCTG GAGCTCATAA TCTGGGAATC GAAGAATATC AAAGAACTGG TCTACCGATT GTTTCCTTTG ATCGTAAGCT TTCAGATAAC ATTCCAATTG TTAGTGCCGA TAACTTCAAA GGTGGCAGTT TAGCTACCCA AGAACTTTAT AATCATGGTG CTCGTCATAT CTATTTTGTA GGAAATCCAA CGCTAGATGG ACACCCTACG CAAAAGAGAC TGCTTGGCTA TAAAGAAACA ATTAAGGAAT TGCAATTAAC GGAGCATATT CATCCAGTAA TTTTTAATGA AACTCTTGCA TTAAAAGAAA TGGCAATTAA AGACTTACTA GAGAATCATA AAGTAGACGG GATCGTAGCA TCTGACGATC TTACTGCTCT TCTGATCATG AACATTAGCC ATGACTTAGG AATCAAAATT CCTAAAGATT TAAAGATTAT TGGATTCGAT GGGAGCAAAG TAGTACGTGA TTTTGAACCA CGTCTGTCTA CAATTGTCCA ACCTATTCCT TCAATTGCAC AACTACTTGT TAAGCTTTTA GAAAAAAGAA TCGACAATCC TACTGAAAAA TTAGATAACT ATACATACTA CCTGCCAGTA GAATTACTTA AGCGTGAATC TAGTGGAAAC TAA
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Protein sequence | MTMVKLTDVA AKAGCSVTTV SRVINNYGYI SQKTRKKVHE AMRELNYQPN SVARSLQGKK TKLIGLIFPD VSNPFFGELV SKIEDQLFNH GYKTILCNAG NDTEKERTYL QMLMANQVDG IIAGAHNLGI EEYQRTGLPI VSFDRKLSDN IPIVSADNFK GGSLATQELY NHGARHIYFV GNPTLDGHPT QKRLLGYKET IKELQLTEHI HPVIFNETLA LKEMAIKDLL ENHKVDGIVA SDDLTALLIM NISHDLGIKI PKDLKIIGFD GSKVVRDFEP RLSTIVQPIP SIAQLLVKLL EKRIDNPTEK LDNYTYYLPV ELLKRESSGN
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