Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1777 |
Symbol | |
ID | 4439007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1761459 |
End bp | 1761965 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639673594 |
Product | histone macroH2A1 family phosphatase |
Protein accession | YP_815589 |
Protein GI | 116630330 |
COG category | [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000000185249 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0000000643755 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATGATC TTCAAGTAAT TCAAGCAGAT ATTACGAAAT TAAAAGTTGA TGCAATCGTT AATGCAGCTA ATCGAACACT TTTAGGTGGT GGTGGAGTTG ATGGTGCGAT TCACCGTGCT GCTGGTCCAG AATTACTTGC AGAATGTCGA ACGCTTCATG GTTGTGAAAC TGGCGAAGCC AAAAGTACTA AGGGCTATAA TTTACCTGCT AAATATGTTA TCCACACAGT TGGCCCTGTG TATAATCCTA ATTTTGCTCA ACAAGATGCT GAGTTATTAG CAGCTTGCTA TCGAAATAGT TTGAATTTAG CTAAGCAATA TAATCTTCAT TCAATTGCTT TTTCATGTAT TTCAACAGGA GTTTACGGTT ATCCAAAAAT AGATGCCGCA AAAATTGCAG TTGAAACTAC TAGGAATTGG CTAAAACAAC AAAATTTTAA TATTAAGGTC TATTTTTGTG TATTTGATTC AGAAAATAAA GCCATATATA ATAAACTAAC GTCTTAA
|
Protein sequence | MNDLQVIQAD ITKLKVDAIV NAANRTLLGG GGVDGAIHRA AGPELLAECR TLHGCETGEA KSTKGYNLPA KYVIHTVGPV YNPNFAQQDA ELLAACYRNS LNLAKQYNLH SIAFSCISTG VYGYPKIDAA KIAVETTRNW LKQQNFNIKV YFCVFDSENK AIYNKLTS
|
| |