Gene LGAS_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1777 
Symbol 
ID4439007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1761459 
End bp1761965 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content35% 
IMG OID639673594 
Producthistone macroH2A1 family phosphatase 
Protein accessionYP_815589 
Protein GI116630330 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000185249 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000000643755 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGATC TTCAAGTAAT TCAAGCAGAT ATTACGAAAT TAAAAGTTGA TGCAATCGTT 
AATGCAGCTA ATCGAACACT TTTAGGTGGT GGTGGAGTTG ATGGTGCGAT TCACCGTGCT
GCTGGTCCAG AATTACTTGC AGAATGTCGA ACGCTTCATG GTTGTGAAAC TGGCGAAGCC
AAAAGTACTA AGGGCTATAA TTTACCTGCT AAATATGTTA TCCACACAGT TGGCCCTGTG
TATAATCCTA ATTTTGCTCA ACAAGATGCT GAGTTATTAG CAGCTTGCTA TCGAAATAGT
TTGAATTTAG CTAAGCAATA TAATCTTCAT TCAATTGCTT TTTCATGTAT TTCAACAGGA
GTTTACGGTT ATCCAAAAAT AGATGCCGCA AAAATTGCAG TTGAAACTAC TAGGAATTGG
CTAAAACAAC AAAATTTTAA TATTAAGGTC TATTTTTGTG TATTTGATTC AGAAAATAAA
GCCATATATA ATAAACTAAC GTCTTAA
 
Protein sequence
MNDLQVIQAD ITKLKVDAIV NAANRTLLGG GGVDGAIHRA AGPELLAECR TLHGCETGEA 
KSTKGYNLPA KYVIHTVGPV YNPNFAQQDA ELLAACYRNS LNLAKQYNLH SIAFSCISTG
VYGYPKIDAA KIAVETTRNW LKQQNFNIKV YFCVFDSENK AIYNKLTS