Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1764 |
Symbol | |
ID | 4439029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1748716 |
End bp | 1749486 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639673582 |
Product | hypothetical protein |
Protein accession | YP_815567 |
Protein GI | 116630318 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.0121246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTGGTTGC TAATGTCAGA TAAGATAAAA ATAATTATTG CTCCTGCTAA AAAAATGAAA GTTGATCAAG ATACTTTTTT AGTTAGATCT AAGCCTGCTT TTTTAGATAA GACGCAAGAG TTGTTAGATT TTTTGAAGAC CAGAAACTTC GATCAGTTAC AAAATTTGTG GAAAGCAAAT GATAATATTG TTCGAACAAA TCAAAGTAAT CTTTTGACCA GTAAACTTGA TAAGAAGTTG ACTCCAGCTA TTTTGGCATT TTCAGGAATT CAATATCAAT ATTTGGCTGG AGATGTTTTA CCGCAAGAGG GATTAGATTA TCTTCAAGAT CATTTACGTA TTTTATCAGG ATTTTACGGT ATTTTGAGAC CATTTGATGG TATAATTCCC TATCGTTTAG AATTAAAAAC ACAAATGACG GGATTTAAAG ACTATAGTCT TTATCATTTT TGGGAAGACT TACCATATCA AGAACTGTTT ACTAATGTAA AAACTGTTAT TAATCTGGCA TCGTTAGAGT ATTCACGTTT GATTTCTCCA TATTTAAAAG AAGGTCAAAA GATGATCACA ATTAAGTTTT TAGAGAATAA AAATGGAAAG TGGCGTCAAA GTGCTACTCA TGCGAAGATG GCACGTGGAG AAATGGTACG TTTTATGGCT AAAGAACAAA TTAATGATCC AGAAGATTTG AAAAAATTTT CTGATTTTGG ATATCTATTT TCAGCAGCAG ATTCTTCCGA AGAAAACTAC ATCTTTAAAA AACGTCTGTA A
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Protein sequence | MWLLMSDKIK IIIAPAKKMK VDQDTFLVRS KPAFLDKTQE LLDFLKTRNF DQLQNLWKAN DNIVRTNQSN LLTSKLDKKL TPAILAFSGI QYQYLAGDVL PQEGLDYLQD HLRILSGFYG ILRPFDGIIP YRLELKTQMT GFKDYSLYHF WEDLPYQELF TNVKTVINLA SLEYSRLISP YLKEGQKMIT IKFLENKNGK WRQSATHAKM ARGEMVRFMA KEQINDPEDL KKFSDFGYLF SAADSSEENY IFKKRL
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