Gene LGAS_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1764 
Symbol 
ID4439029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1748716 
End bp1749486 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content31% 
IMG OID639673582 
Producthypothetical protein 
Protein accessionYP_815567 
Protein GI116630318 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0121246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGTTGC TAATGTCAGA TAAGATAAAA ATAATTATTG CTCCTGCTAA AAAAATGAAA 
GTTGATCAAG ATACTTTTTT AGTTAGATCT AAGCCTGCTT TTTTAGATAA GACGCAAGAG
TTGTTAGATT TTTTGAAGAC CAGAAACTTC GATCAGTTAC AAAATTTGTG GAAAGCAAAT
GATAATATTG TTCGAACAAA TCAAAGTAAT CTTTTGACCA GTAAACTTGA TAAGAAGTTG
ACTCCAGCTA TTTTGGCATT TTCAGGAATT CAATATCAAT ATTTGGCTGG AGATGTTTTA
CCGCAAGAGG GATTAGATTA TCTTCAAGAT CATTTACGTA TTTTATCAGG ATTTTACGGT
ATTTTGAGAC CATTTGATGG TATAATTCCC TATCGTTTAG AATTAAAAAC ACAAATGACG
GGATTTAAAG ACTATAGTCT TTATCATTTT TGGGAAGACT TACCATATCA AGAACTGTTT
ACTAATGTAA AAACTGTTAT TAATCTGGCA TCGTTAGAGT ATTCACGTTT GATTTCTCCA
TATTTAAAAG AAGGTCAAAA GATGATCACA ATTAAGTTTT TAGAGAATAA AAATGGAAAG
TGGCGTCAAA GTGCTACTCA TGCGAAGATG GCACGTGGAG AAATGGTACG TTTTATGGCT
AAAGAACAAA TTAATGATCC AGAAGATTTG AAAAAATTTT CTGATTTTGG ATATCTATTT
TCAGCAGCAG ATTCTTCCGA AGAAAACTAC ATCTTTAAAA AACGTCTGTA A
 
Protein sequence
MWLLMSDKIK IIIAPAKKMK VDQDTFLVRS KPAFLDKTQE LLDFLKTRNF DQLQNLWKAN 
DNIVRTNQSN LLTSKLDKKL TPAILAFSGI QYQYLAGDVL PQEGLDYLQD HLRILSGFYG
ILRPFDGIIP YRLELKTQMT GFKDYSLYHF WEDLPYQELF TNVKTVINLA SLEYSRLISP
YLKEGQKMIT IKFLENKNGK WRQSATHAKM ARGEMVRFMA KEQINDPEDL KKFSDFGYLF
SAADSSEENY IFKKRL