| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1762 |
|---|
| Symbol | |
|---|
| ID | 4439027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1747236 |
|---|
| End bp | 1748018 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639673580 |
|---|
| Product | alpha/beta fold family hydrolase |
|---|
| Protein accession | YP_815563 |
|---|
| Protein GI | 116630316 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00000326151 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.089199 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAA AGAAAAAGAA AGTAGGCATT TATATGGCAA CAATTACAAT TGAGCGCGAT
GGCTTAAACT TGGTTGGAAC TCGTGAAGAA CCTTTTGGTG AAATTTATGA TATGGCAATT
ATTTTTCACG GTTTCACTGC TAACCGTAAT ACACCTCTTC TAAAAGAAAT TGCTGATGAA
CTACGTGATG AAAATATTGC TAGTGTTCGT TTTGACTTTA ACGGTCATGG TGATTCTGAT
GGAAAATTCG AAAACATGAC TGTTCTAAAT GAAATCGAAG ATGCTAATGC GATTTTAAAT
TACGTTAAAA CTGATCCACA TGTACGTAAT ATTTATTTGG TAGGACATTC TCAAGGCGGT
GTTGTTGCTT CAATGCTTGC TGGGCTCTAT CCAGATATTA TTAAAAAAGT AGTTCTTCTA
GCTCCAGCTG CCACCTTAAA AACTGATGCT CTCAACGGGA GTACGCAAGG GGTTAAATAC
AATCCAGACC ATATTCCGGA CCGCTTGCCA TTTAAGGATC TAACATTAGG CGGTTTTTAC
TTACGTATTG CACAACAATT ACCTATTTAC GAAGTATCAG TTCACTTTAC TAGACCTGTC
TGCTTGATAC ATGGTGCAAA TGACACAGTT GTCTCCCCCG ATGCCTCAAA AAAATACGAT
CAAGTTTATG AAAATAGTAC TCTTCACTTA GTTGAAGGTG CGGACCACAG CTTTACTGAT
ACTTACCAAA AAACTGCAGC TGATCTAACA GCAGAATTTT TACAAGATAA TAATACTTTT
TAA
|
|---|
| Protein sequence | MKLKKKKVGI YMATITIERD GLNLVGTREE PFGEIYDMAI IFHGFTANRN TPLLKEIADE
LRDENIASVR FDFNGHGDSD GKFENMTVLN EIEDANAILN YVKTDPHVRN IYLVGHSQGG
VVASMLAGLY PDIIKKVVLL APAATLKTDA LNGSTQGVKY NPDHIPDRLP FKDLTLGGFY
LRIAQQLPIY EVSVHFTRPV CLIHGANDTV VSPDASKKYD QVYENSTLHL VEGADHSFTD
TYQKTAADLT AEFLQDNNTF
|
|---|
| |