| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1753 |
|---|
| Symbol | |
|---|
| ID | 4439018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 1737687 |
|---|
| End bp | 1739108 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639673571 |
|---|
| Product | dipeptidase |
|---|
| Protein accession | YP_815546 |
|---|
| Protein GI | 116630307 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4690] Dipeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000176291 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACCTA TGATATCTCC TGTTGGACGT TCTTCTTGTA CATCGATTTT AATTGGTAAA
AAAGCCACTG TCGATGGCAG CGTAATTATT GGCCGTAATG AAGATGCTAA AACTGCTTGG
CCAAAGCATC TTGCATTTAA CCAACATCAA ATAAAGAAAA ATAACATTTT TAAATCAAAA
GATAATAAAT TTCAAATAAC ACTACCTAAC GAACGTTTTT CTTATTCTTC TACCCCTGAA
TGGATAGATA AATATGGTGT ATTCGAAGAA GATGGTATCA ATGAATATCA CGTTGCAATG
AGTGCTACAG AAAGTGCTTA TGCTAATGAT CGTGTCATGG CTGTTGATCC TTTTGATGAA
GAAAAAGGGA TCTTAGAAGA AGCTATGATA ACAGTTGTTC TGCCATTCAT TAAATCCGCT
CGAGAAGGTG TTGAACGTTT AGGTAAAATT GTTCAAGAGC ATGGCGCAGC TGAAGCAGAT
GGAATTTTAT TTGCAGATAG AGATGAAGCC TGGTATATGG AGATTGGTTC TGGTCATCAT
TATGTTGCTC AGCGTATTCC CGATGATTCT TATGCCGTAG TAGCTAATCA ATTAGCAATT
CAAGTAATTG ATTTTAGTGA TAAAAAGAAT TTCATTACCT CTCCTGGCAT TCAAGATTTC
GTTTATCAAA ATAATCTCTG GCCAAAGAAT AAACCATTTA ATTTTAGATT AATATTTGGT
ACACATGATG ATTCTGATTT AACTTACAAT ACGCCACGTG TTTGGAGTGG GCAAAAACTC
TTGACTCCAT CAGTAAGCCA GGATCCAGAA AGTTTTGATC TACCATTTAT TAGAAAACCT
GATCATCCTA TATCAATTCA AGAAGCGCAA CGTGTTTTGA GTGATCACTT CAATGGTACA
AAATATGATT TAACTAATTC TAAAAATGAA GGACAACCAG CTTACCGACC AATTGCTGTT
GCTACCACTC AAGAATCTCA TTTGTTGCAG CTCAGAGATG AAGATATGGT TCATTGGCTT
GCAATGGGAA TTGCTGCTCA AAGTGTTTAC ATTCCCTTCT ATCCTCAAGG CACTCAAGTA
CCTACGATGT TTAAATACGG AAAAGAAGAA TTTACTACTA ATTCCGCCTA TTGGGTCTTT
AAAATGGCTA GCGTCTTAGT TGATCGGAAT TGGAGTAAAT ATGCAACTAA TTTAGTTAAT
ACTCAAAAAG CAACTAATCT AGCTTTGAAT AAATTACGAG TTGATTACGA CAAAAAATTA
GCTCAAGAAA AAGATAATGC TAAAAAAATT GATCTAGTCA ATGAAGCAAA CAAAAAACTA
GCTGATGTTG CTATTAAGAA CTATCAAAAA CTAATTGCAA AACTTATCAC TGCTCAAACG
GCAGATTCTC CATTGAGATT TAAGATTGAT CCTAATTTGT AA
|
|---|
| Protein sequence | MKPMISPVGR SSCTSILIGK KATVDGSVII GRNEDAKTAW PKHLAFNQHQ IKKNNIFKSK
DNKFQITLPN ERFSYSSTPE WIDKYGVFEE DGINEYHVAM SATESAYAND RVMAVDPFDE
EKGILEEAMI TVVLPFIKSA REGVERLGKI VQEHGAAEAD GILFADRDEA WYMEIGSGHH
YVAQRIPDDS YAVVANQLAI QVIDFSDKKN FITSPGIQDF VYQNNLWPKN KPFNFRLIFG
THDDSDLTYN TPRVWSGQKL LTPSVSQDPE SFDLPFIRKP DHPISIQEAQ RVLSDHFNGT
KYDLTNSKNE GQPAYRPIAV ATTQESHLLQ LRDEDMVHWL AMGIAAQSVY IPFYPQGTQV
PTMFKYGKEE FTTNSAYWVF KMASVLVDRN WSKYATNLVN TQKATNLALN KLRVDYDKKL
AQEKDNAKKI DLVNEANKKL ADVAIKNYQK LIAKLITAQT ADSPLRFKID PNL
|
|---|
| |