Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1748 |
Symbol | |
ID | 4439048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1734190 |
End bp | 1735230 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639673566 |
Product | hypothetical protein |
Protein accession | YP_815538 |
Protein GI | 116630302 |
COG category | [S] Function unknown |
COG ID | [COG3589] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000772543 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGTT TTTCAGTTTA CTTGGATAAA GATTTAACAG CAGATGACCA TAATTATTTG CTGGGAATGA GAAACGCTGG TTTTAACGAG GTATTTACTT CGTTGACTGG GTTAAATGAT GAAGCAGAAA CAATTTTAAA GAGATTAAAT CAGTTAACTA GCTGGTGCAA GGATCTAGAA TTAAAGGTCA TGGCTGATGT GTCGCAAGAT GATTTACATT ATTTAGGCTA TGATTTAGCC GATGTAGAAA AATTAAAGAC ACTTAACGTT ACAGGCTTAA GAATTAATGA TCAAGTATTG ATGCGGTTTG TATCTAAATT ATCTAAATCT ATGTGGGTAT CTTTAAATGC AATTTATTTA CAGCCAGAAG ATATTACTCA TTTGAAAGAA GAAGCAGCTA ACTTTGATCA TATTAGGGCT TTATTTGATT TCTATTCTCA AGCAGAAACT GGAATGGATG AAAGTTGGTT TAAGAAGAAA AATCAATGGC TACGTAAATG TAATTTAGAA ACTGCGGCTT TTATTTCAGG AGATGGCGTT AAGAGAGGTC CATTTTTTGC TGGAGAAACT ACACTTGAAT CTCAACGAGG TGTTTACCCA TTAGCTGCGG CTCTTAACTT GAAAGACTTA GCTTGCAGTA ATGTTATTGT GGGCGATCGT CTAACTAGCG AAACGATTAA GTCTTTTGCG CGTTACACTA AAGAACATGC AATTACGCTT CACGTAGTAG ATGAAGAAAG TTCATTGCTT GAAGAAAATC ACTGGCACAA TTATTTGTAT CTTGCTCAAG ATATCGTTAG ACTACATTGT GAAGGAAAAT TACCCGAACT TGAAGCTCAA GAATTGCCGT TAGACCGTCC TGCTGGAACG ATTAGTATTA ATAGTAATGG CTTAAACAGT GATGAAGTTC ATATTACTAA GCGTAACTTG CCAGCTGATA AAGAAGTAAG AATAGTTGGT AAGGTTTGTG CTAGTGAGTG TAGTTTGCTT TCGCATATTG AGCCAGAGCA AAAAGTTGTT TTTAAAAAAT TAGAAAAGTA G
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Protein sequence | MLGFSVYLDK DLTADDHNYL LGMRNAGFNE VFTSLTGLND EAETILKRLN QLTSWCKDLE LKVMADVSQD DLHYLGYDLA DVEKLKTLNV TGLRINDQVL MRFVSKLSKS MWVSLNAIYL QPEDITHLKE EAANFDHIRA LFDFYSQAET GMDESWFKKK NQWLRKCNLE TAAFISGDGV KRGPFFAGET TLESQRGVYP LAAALNLKDL ACSNVIVGDR LTSETIKSFA RYTKEHAITL HVVDEESSLL EENHWHNYLY LAQDIVRLHC EGKLPELEAQ ELPLDRPAGT ISINSNGLNS DEVHITKRNL PADKEVRIVG KVCASECSLL SHIEPEQKVV FKKLEK
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