Gene LGAS_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1748 
Symbol 
ID4439048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1734190 
End bp1735230 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content35% 
IMG OID639673566 
Producthypothetical protein 
Protein accessionYP_815538 
Protein GI116630302 
COG category[S] Function unknown 
COG ID[COG3589] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000772543 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGTT TTTCAGTTTA CTTGGATAAA GATTTAACAG CAGATGACCA TAATTATTTG 
CTGGGAATGA GAAACGCTGG TTTTAACGAG GTATTTACTT CGTTGACTGG GTTAAATGAT
GAAGCAGAAA CAATTTTAAA GAGATTAAAT CAGTTAACTA GCTGGTGCAA GGATCTAGAA
TTAAAGGTCA TGGCTGATGT GTCGCAAGAT GATTTACATT ATTTAGGCTA TGATTTAGCC
GATGTAGAAA AATTAAAGAC ACTTAACGTT ACAGGCTTAA GAATTAATGA TCAAGTATTG
ATGCGGTTTG TATCTAAATT ATCTAAATCT ATGTGGGTAT CTTTAAATGC AATTTATTTA
CAGCCAGAAG ATATTACTCA TTTGAAAGAA GAAGCAGCTA ACTTTGATCA TATTAGGGCT
TTATTTGATT TCTATTCTCA AGCAGAAACT GGAATGGATG AAAGTTGGTT TAAGAAGAAA
AATCAATGGC TACGTAAATG TAATTTAGAA ACTGCGGCTT TTATTTCAGG AGATGGCGTT
AAGAGAGGTC CATTTTTTGC TGGAGAAACT ACACTTGAAT CTCAACGAGG TGTTTACCCA
TTAGCTGCGG CTCTTAACTT GAAAGACTTA GCTTGCAGTA ATGTTATTGT GGGCGATCGT
CTAACTAGCG AAACGATTAA GTCTTTTGCG CGTTACACTA AAGAACATGC AATTACGCTT
CACGTAGTAG ATGAAGAAAG TTCATTGCTT GAAGAAAATC ACTGGCACAA TTATTTGTAT
CTTGCTCAAG ATATCGTTAG ACTACATTGT GAAGGAAAAT TACCCGAACT TGAAGCTCAA
GAATTGCCGT TAGACCGTCC TGCTGGAACG ATTAGTATTA ATAGTAATGG CTTAAACAGT
GATGAAGTTC ATATTACTAA GCGTAACTTG CCAGCTGATA AAGAAGTAAG AATAGTTGGT
AAGGTTTGTG CTAGTGAGTG TAGTTTGCTT TCGCATATTG AGCCAGAGCA AAAAGTTGTT
TTTAAAAAAT TAGAAAAGTA G
 
Protein sequence
MLGFSVYLDK DLTADDHNYL LGMRNAGFNE VFTSLTGLND EAETILKRLN QLTSWCKDLE 
LKVMADVSQD DLHYLGYDLA DVEKLKTLNV TGLRINDQVL MRFVSKLSKS MWVSLNAIYL
QPEDITHLKE EAANFDHIRA LFDFYSQAET GMDESWFKKK NQWLRKCNLE TAAFISGDGV
KRGPFFAGET TLESQRGVYP LAAALNLKDL ACSNVIVGDR LTSETIKSFA RYTKEHAITL
HVVDEESSLL EENHWHNYLY LAQDIVRLHC EGKLPELEAQ ELPLDRPAGT ISINSNGLNS
DEVHITKRNL PADKEVRIVG KVCASECSLL SHIEPEQKVV FKKLEK