| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1725 |
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| Symbol | |
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| ID | 4439077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1703249 |
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| End bp | 1709230 |
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| Gene Length | 5982 bp |
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| Protein Length | 1993 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673543 |
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| Product | hypothetical protein |
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| Protein accession | YP_815492 |
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| Protein GI | 116630279 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCCA AGAACAATTA TAGTGAAAAA ATGCGGAAAA TTAGACCGCA AAAGCAACGC
TTCTCTATTC GTAAGTTTAC TGTAGGTGCT GCCTCTGTAT TGATCGGGTT AACCTTCATG
GGAGTTAATG GTCGAACAGT TAAAGCTGAT ACTACAGTTA CTCAAGAAGA AAGTATAAAT
GTAACAAATG ATGTAGCTAA TAACTTAAAA GAAAACGTTG AAAATACGGT AAGTGTTGAA
GAGCAAAGTG CAGTTCAGCA TGTAGAACAA GCAAAAACAG CTTCAATAGA AACAAACAAT
GACGTTGAAA ATAATGAAAC TACTAATGAA ATAAGTAGTG AAGTAGCTGG AAATAATGAA
TTTGTTTCTT CAGCAGAAAC AAGTGCTGTA GAAGAAAAAG CAGCTAACGA AGCAACCACT
TATGACGCTG AATCAACTAA AGACGAAACA GTAGTAAATA ATACTCAAAA TGTTGAAAAC
AATAGTCTTC AATCTACTGA AAGCATAGCA ACACCTGTAG TTGAGAATAA TGCTACTACC
ACTGTTGAAG AATCTACTCC AGTTACAGAA ACTACTCCTG TTGAAACTGA AACGAAAGTT
GAAAATGTAG TTTCTCCAAT TGAAGAAACT GTAGTAGAAG AAAACAATCA AACTACCGTT
CAAACAGATG TTAAAGAAGT TCAAAGTAAG GCTTCTGTGA CTATTCCTGC AACAGATACA
GATAAATATC CAAAAGAAGC AGGTGCTTTA ATTGGTGACG ATAAGTATAT ATATCAAATT
TTAGATTTAA ATAATACTGC CTTTTGGAAT AGTAGCAATA AAAAACTTAT TCTATCTGTA
AATCGTAATG ATTTAACTGA TGAAAATCTC TATGCTTACG TGACTGATGC TGATTATAAA
AATATGGTAG CTGAACATAT CATTAAAGCA GGATATTTCA AGAAAATTGA AGTAAACAAT
AGAGACTTTT TAATTGTAAA TAGTGGTAAA TCTAATATCA CAGTCGGCGG TAGTTCAATG
CCTGTTGGTA ATGCTACAAC GGTTGTTGGT AGCACTAAAA TTATCTATGG CCTAGGAAAT
ATCACTAATT TAGATGCGAG CTCAGTAGGT GAAATTATTC CAGTTCATAC TGAGGAATCT
GTAATTAAGT ACTACTACCA CAATAAAGAT GGTAATTTAG TTGAGATTCC AGGTACTGAT
AAATATCCTA ATGTTAGTGT TTCTGGTTGG ACAGGACAAG AATTCGTTAT TGATAATGTT
GACCAATACA AACAACTAAT TGATGGTTTT TATTTAGATG GCTCAAATAT CCCTAGTGGA
TCATTTACTG GAACTATCTC TCAATTTGGT GATGGTAGTT ACTACAAGAA GGTTTACTAC
AGTTCTGGCA ATAGAACAGA AGGTACTGTT AACCAATTAA CAGTTGACTT CACTGTAGTT
TACCGTCAAA TTGATGCTAC AGGTAAGATG GAAGTTCTTA TGTATGACGG CAGTAATATG
GATCGTGTGA TTGAAAGTCA TACTGTAGAG GCTGGTAAAT CAGTTAAATT TACTCATAAT
AACTTTACTG CAAGAAATCC ATTCGTAACT GACTCAGCTC ATGAAGTACA GTTTATTTAC
AAGGACTTGG GTTCGATTAT TCCAGTTGAT GAAAATGGTA ATCAAATTGG GGATGCTGTG
AAGTTTAATA ATAACTTAAC TGACCCAATA AAGGCTGGTA GAACTGATGC ACCAATTATT
GCAGGATACA TTGCTGATAT TGAATATGTA ATTCCTGAAA ATCCAGGTGA AGATATCAAA
GTAATTTATC GCTTACGTGA AGATGTAAAA GCTACAATTA CGATTATTGA TATGGACAAT
AACCGTAATA GTCTTGCTCA ATTAAACGCT ACTGGAAAAG TATATTCTCA AATTAACTTT
GTGGATTTAG ACACTACTCT TTCCAATTTG CTTGATAGTG GCTATGTAAT TATTAGTAAT
AGCTTTAAAC CTGGTACTCA ATTTGGTGTT CATGATTTAA ACTTTGAAAT TCAATTAAAG
CATGTCCTTG AAGCAGTTAA TGAATCACAA ACAGTTCAAA AAGATATTCA CTATGTAGAT
ACAGTGGGAA ATGAACTACG TCCTTCAACT ACTCAGACAG CAACTTTCAC TGCTACTGGT
TATCGCGATA AGGTAACTGG AAATATTGTC TTAGTTGCTG GTACTCAACA AGTAGGTAAT
GACTTAATTG CTACTGAGAT TACTGATAAA AATGCTAGTC TAAAATGGAC TGCGGATAAG
ACAACTTTTG AATCTCTTAA ATCTCCAGAT ATCATTGGTT ACACTACTAA TCAAAAGTGG
AGTACAGCAG ATAAAGTAGA GCAGAATGAA AAGTTAAAGA TAGAAAATAT CATTTACGAT
AAAAAAGCTC AGGTAGGTAC AATTATTTTC TGGGATGAAA CATCTCAAAA ACAACTTGGT
ACTACTGTCA ATATTACTGG AAATTATGGT GAAGTTATAA ATTACCAGGT TATTGATAAG
GTTTTAGGTA GCATCAAGGA TTACGAAAAT AATGGCTACA TTTTAGTGAA TAATCCTCTA
GGATATACGA CAGTCTTTGG AGATGCAGAC TATAACCCAG GCTGCAATGA CTATGTAGTT
ACGTTAAAAC ATAAAATAGC TGAAAATTCA CAAACTAAAG AAGTAAATCG TGTCATTACA
TATGTCTATG CTGATGGCCC TAATAAAGGT CAAACAGCTG CCAATTCTGT TATTCAAAAA
GTTAACTTTA TTGGAAAAGG TCAATATGAC TTTGTAGATA AAGTTTGGGT TAGCGATATT
GTTTGGACTG CAGAAGATGG CAATGCTAAC TATACTTTTG CTCAAGTAAA TTCACCAAAG
ATTTCAGGAT ACGGTGCAAA TAGGTTGCAA GTAGAATCAG TTTTAGTCAG TGGTAATTCA
AATAATATCA CTGAAGAAGT TCTTTACTAT GCAAACCAGC AAACTGCTCA GATTCAATAT
ATTGATGATG TAACTGGTAA AATTATCGGT AGTGATACTG TTAATGGTAA AATTGATCAC
ATTATTAGCT GGAATTTAAA TCCTGAAGCT ACACTTAAAA TGTTTGAAAA TAATGGCTAC
AAACTTGTAA GTAGTGATTA CGAATTCGGT AAAGATTACT ACTATTCTGC AGAAGATGCC
AAAAACAGTT TTAAGGTTCA CTTAACTAGA GATTTGATCA TTATTGATCC TGAAGATCCA
GATAGTCCAG TCTATGAATC AGAAGATTAC AACAAAGAAG TAACTCAAGA GATCAAATAT
GTTTATGCAA ATGGCAATGC AGCAGCTGAA AGTAACAAGC AAACCATTAA GTTTACTGCT
TATGGAGTTG TAGATAAGAC AACTGGAAAA TATGTAGTTC TTGATGAAAA CGGCAAAGTC
ATTATTGGCG ATGATGGAGA ACCGATTGAA GGCAAACTTG CATGGACTGC AGAAGTTGCT
GATCCTAAGT TTACTGAAGT AAGCTCACCG ATTATAACTG GTTATACTCC AGACAAAGCT
AGTGTTTCTG GAACTAAAGT GACCCATGAT CTGCCAAGTA AGGTAATCGT AGTTACTTAT
ACTGCAAATG ATGCCGATGC TAAAGTTATT TTTGTAGATA AGACAACTGG TAAAGAATTA
GAAGCAGTAA CCCTAAACGG AAAATACGGC GATGTTATCA ATTACAGTAC AGCCGACAAA
ATTAAATACT ACGAAAACTT GGGCTATGAA TTAGTTGATG ATGGCTATAA TGGCGGTAAA
TTTGGTGAGA CAACTAAGAC TTTCTATGTG ACATTTAAAC ATGGTGTAGT TCACGTTCAT
CCAGAAAACC CTGGAAAACC TGGTGAAAAC ATTAATCCAG GTGGGGATGT TAAATATCCA
ACTGATTCTG GTGTTTTAAA TAAAGATGTA ACACATACTG TTCATTATGT TTATGCCGAT
GGCACAATAG CAAATCCAAG CCATACTCAG ACAATTACAT TTACAGGATC TGGTCACATT
AATAAGGTAA CTGGTGAATA TGTAGAAGTT GATGAAGATG GCAACATTAA ACTAGATACA
GATGGTAAGC CAGTTCCTGG TAAATTGAAC TGGATGGCTA TGCTTGGAAA TAGTTTCTTA
GCTGTTACAT CTCCACAAAT TACAGGTCAT ACACCTAGTC ACGTGCAAAT CGACGGCGTT
GAAAATGTGG CACATGATAG TGAAAACTAT GTTCATACTG TAACTTACAC AGCAAATGCC
GCTAAAGCTG AAATTGTCTA CGTTGACGAA ACTACTGGAA AAGAGCTAGA AGTAGCTACA
GTAGACGGCA AGTACAATGA AGAAATCAAC TACAGCACAG CTGACAAGAT TAAGTACTAT
GAAAGCTTAG GCTATGAGTT AGTTAAGGAT GGTTATAATG GTGGCGAATT CGGTGAAACA
ACTAAGAAAT TCTATGTAAC ATTCAAACAT GGAACTGTAG TTGTAAATCC AGAAAATCCT
GGAAAACCAG ATGAACCAAT TAATCCAAAC GATCCAGAAG GGCCAAAATA TCCAACTGAT
TCAGCTAACT TAAATAAAGA TGTAACACAT ACTATTCACT ATGTTTACGC TGATGGTACA
ACAGCTAAAC CAAGTCATAC ACAAACTTTA ACTTTCACAG GTTCTGGTGT GATTGATAAG
GTAACTGGCC AATACGTAGA AGTCGATGAA AATGGCAACA TTAAGTTAGA TGCAAACGGT
AAGCCAGTTC CAGGTAAGTT AACTTGGGTA GCCGAAGATG GTACAACTTT TGTCGAAGTA
ATTTCTCCAA CAATCGCAGG CTACACTGCA GATAAGACTG TTGTGAATGC AATTGAGGGA
ATCAATCAAG ATAGCAATCA TCTTGAAACT AAAGTTGTCT ACACAGCAAA TGCTGCTAAA
GCTGAAATTA TCTACATTGA TGAAACTACT GGTAAAGAGC TGGAAACAGT CACAGTAGAT
GGTAAATACA ATGAAGAAAT CAACTACAGC ACAGCTGACA AGATTAAGTA CTACGAAAGC
TTAGGCTATG AGTTAGTTAA GGATGGTTAT GAACAAGATG GTAAATTTGG ATTAGAAACA
AGCAGATACT ATGTAACGCT CAAGCATGGT ACAATTACTG TTACTCCTGA TGACAAGTTC
ACAGAAGATG ATCCAATTAA TCCAGACAAT CCTGAGGGAC CAAAATATCC ATTCGATTCA
ATTGCTTTAG ATAAGACCAT TACTCGTACA ATTAAGTACG TTTACGCTGA TGGAACTAAG
GCAAAAGATG ACGTGGTTCA AACTTTGAGA TTCCGTGGTA CAGCGGTAAT TGATAAAGTG
ACTGGTGAGA TCATTATTTT AGATGAAAAT GGTAGAAAAG TTTCTGATGG AATTAAATGG
GCTGCACTTG ATGGCACAAC ATTTGTACAG GTTATTTCTC CAGAAATTGC TGGCTACACA
GCCGATAAGA AAGAAATTGG CAGTGTTGAA AATGTAGATA GTGATACTGA GAATATTACT
GAAACCGTAG TTTACAGTAA GAATCCTGAA AAGCCGGTTG AACCGAATAA GCCAGAAGAA
CCAACTGAAC CTGAAGTTCC AGTAGAACCT GAGAAACCTG AGGCGCCTGA AGCTCCAGAA
GAACCAGAGA AGCCAACTGA ATCTGAAACT CCAGAAGAGT CAGACCAACC AGTTGAACCG
CTAAAACCAG AAGCTTCAGA AAATAAACCA ACTGAAGCAA CAGAATCAGA TAAATCTGAC
GCTGGCACTC TTCCAGATAA TATTTCTATT GATACTACAG CTAAGAATGT CTCAACTGTA
GAACATAAAG AAACTGGAAA AGTAGAAGCA GCAACGACTA ATGAGGTTTC ATTACCTCAA
ACAGGACATA AACATTCTAA TGTAGGAATT ATTGGACTAG GCTTAGCAAC AATTGCGTCA
ATTTTAGGCT TAGCTGGCAC TAGAAAACGT AAAAAGAATT AG
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| Protein sequence | MVSKNNYSEK MRKIRPQKQR FSIRKFTVGA ASVLIGLTFM GVNGRTVKAD TTVTQEESIN
VTNDVANNLK ENVENTVSVE EQSAVQHVEQ AKTASIETNN DVENNETTNE ISSEVAGNNE
FVSSAETSAV EEKAANEATT YDAESTKDET VVNNTQNVEN NSLQSTESIA TPVVENNATT
TVEESTPVTE TTPVETETKV ENVVSPIEET VVEENNQTTV QTDVKEVQSK ASVTIPATDT
DKYPKEAGAL IGDDKYIYQI LDLNNTAFWN SSNKKLILSV NRNDLTDENL YAYVTDADYK
NMVAEHIIKA GYFKKIEVNN RDFLIVNSGK SNITVGGSSM PVGNATTVVG STKIIYGLGN
ITNLDASSVG EIIPVHTEES VIKYYYHNKD GNLVEIPGTD KYPNVSVSGW TGQEFVIDNV
DQYKQLIDGF YLDGSNIPSG SFTGTISQFG DGSYYKKVYY SSGNRTEGTV NQLTVDFTVV
YRQIDATGKM EVLMYDGSNM DRVIESHTVE AGKSVKFTHN NFTARNPFVT DSAHEVQFIY
KDLGSIIPVD ENGNQIGDAV KFNNNLTDPI KAGRTDAPII AGYIADIEYV IPENPGEDIK
VIYRLREDVK ATITIIDMDN NRNSLAQLNA TGKVYSQINF VDLDTTLSNL LDSGYVIISN
SFKPGTQFGV HDLNFEIQLK HVLEAVNESQ TVQKDIHYVD TVGNELRPST TQTATFTATG
YRDKVTGNIV LVAGTQQVGN DLIATEITDK NASLKWTADK TTFESLKSPD IIGYTTNQKW
STADKVEQNE KLKIENIIYD KKAQVGTIIF WDETSQKQLG TTVNITGNYG EVINYQVIDK
VLGSIKDYEN NGYILVNNPL GYTTVFGDAD YNPGCNDYVV TLKHKIAENS QTKEVNRVIT
YVYADGPNKG QTAANSVIQK VNFIGKGQYD FVDKVWVSDI VWTAEDGNAN YTFAQVNSPK
ISGYGANRLQ VESVLVSGNS NNITEEVLYY ANQQTAQIQY IDDVTGKIIG SDTVNGKIDH
IISWNLNPEA TLKMFENNGY KLVSSDYEFG KDYYYSAEDA KNSFKVHLTR DLIIIDPEDP
DSPVYESEDY NKEVTQEIKY VYANGNAAAE SNKQTIKFTA YGVVDKTTGK YVVLDENGKV
IIGDDGEPIE GKLAWTAEVA DPKFTEVSSP IITGYTPDKA SVSGTKVTHD LPSKVIVVTY
TANDADAKVI FVDKTTGKEL EAVTLNGKYG DVINYSTADK IKYYENLGYE LVDDGYNGGK
FGETTKTFYV TFKHGVVHVH PENPGKPGEN INPGGDVKYP TDSGVLNKDV THTVHYVYAD
GTIANPSHTQ TITFTGSGHI NKVTGEYVEV DEDGNIKLDT DGKPVPGKLN WMAMLGNSFL
AVTSPQITGH TPSHVQIDGV ENVAHDSENY VHTVTYTANA AKAEIVYVDE TTGKELEVAT
VDGKYNEEIN YSTADKIKYY ESLGYELVKD GYNGGEFGET TKKFYVTFKH GTVVVNPENP
GKPDEPINPN DPEGPKYPTD SANLNKDVTH TIHYVYADGT TAKPSHTQTL TFTGSGVIDK
VTGQYVEVDE NGNIKLDANG KPVPGKLTWV AEDGTTFVEV ISPTIAGYTA DKTVVNAIEG
INQDSNHLET KVVYTANAAK AEIIYIDETT GKELETVTVD GKYNEEINYS TADKIKYYES
LGYELVKDGY EQDGKFGLET SRYYVTLKHG TITVTPDDKF TEDDPINPDN PEGPKYPFDS
IALDKTITRT IKYVYADGTK AKDDVVQTLR FRGTAVIDKV TGEIIILDEN GRKVSDGIKW
AALDGTTFVQ VISPEIAGYT ADKKEIGSVE NVDSDTENIT ETVVYSKNPE KPVEPNKPEE
PTEPEVPVEP EKPEAPEAPE EPEKPTESET PEESDQPVEP LKPEASENKP TEATESDKSD
AGTLPDNISI DTTAKNVSTV EHKETGKVEA ATTNEVSLPQ TGHKHSNVGI IGLGLATIAS
ILGLAGTRKR KKN
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