| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1707 |
|---|
| Symbol | |
|---|
| ID | 4439094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 1689342 |
|---|
| End bp | 1689683 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639673525 |
|---|
| Product | toxin-antitoxin addiction module toxin component MazF (an endoRNAse) |
|---|
| Protein accession | YP_815460 |
|---|
| Protein GI | 116630261 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2337] Growth inhibitor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.000000119812 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGA TTAAATTTAA ACAAGGAGAT ATTGTATGGG CAGATTTTTC ACCTTCAGTT
GGACAAGAAA TGAAAGGAAA ACATCCAGCA GTTGTAGTGT CTTCTAATTC ATATAATGAG
AAAACTAATT ATTTAATGTT GTGTCCCATT ACTTCACATG GTAATCACTT CCCGACATAT
CTAGACTTGC TAGGCTATCA TGTTCATGGC CGAGTAAATG CAGCACAAAT TCAAACTTTT
TCAAGAATGC GTTTATTAGA TGAAAAACCA GCAGATCATC TTAGACCGGA AGATATGCTT
AAGGTAATGG AACTACTTAG CTTTGCTTTA CAGTTTGATT AG
|
|---|
| Protein sequence | MPKIKFKQGD IVWADFSPSV GQEMKGKHPA VVVSSNSYNE KTNYLMLCPI TSHGNHFPTY
LDLLGYHVHG RVNAAQIQTF SRMRLLDEKP ADHLRPEDML KVMELLSFAL QFD
|
|---|
| |