| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1704 |
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| Symbol | nrdI |
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| ID | 4439091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1687341 |
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| End bp | 1687802 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639673522 |
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| Product | ribonucleotide reductase stimulatory protein |
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| Protein accession | YP_815454 |
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| Protein GI | 116630258 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1780] Protein involved in ribonucleotide reduction |
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| TIGRFAM ID | [TIGR00333] ribonucleoside-diphosphate reductase 2, operon protein nrdI |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0804489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00000000216411 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTAAAAA TAGCTTTTTA TACAATTACA GGACAAACGC AACGATTCAT AAATAAAACG
GGCCTTGATG CACATCGGAT TGAGGATGCT CATCCTCAAT ATCAAATGAA TGATAAATAT
ATTTTGATCT TACCGTCGTA TCAAGATTTT ATGATGGATT CTGTTGTTGA TTTTTTAACA
TATAAAGATA ATAAAGAGAA CCTTTTAGGT TTAATAGGAT GTGGCAATCG TAACTTTAAT
GATCTCTTTG CCCAAACAGC AAAAAAGATC TCTGTTACAC TGCACGTTCC GATTCTCTAT
TTACTTGAAC TAAGTGGCAA TTCGACTGAT GTCAAAAACG TTCGTCAAAT TGTCAAAGAA
GCTCGTAAAA AAGAACGGGG TGCTCAAAAA GATTTGCCAG TTCAAAATCC ATCTCTTAGC
AATATTAGTT TCTTAAGTGA CTTCAGGCAG AAAAATGAAT AA
|
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| Protein sequence | MVKIAFYTIT GQTQRFINKT GLDAHRIEDA HPQYQMNDKY ILILPSYQDF MMDSVVDFLT
YKDNKENLLG LIGCGNRNFN DLFAQTAKKI SVTLHVPILY LLELSGNSTD VKNVRQIVKE
ARKKERGAQK DLPVQNPSLS NISFLSDFRQ KNE
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