| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1693 |
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| Symbol | |
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| ID | 4439115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1674907 |
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| End bp | 1676775 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639673511 |
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| Product | peptide ABC transporter permease |
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| Protein accession | YP_815422 |
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| Protein GI | 116630247 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 2.18804e-19 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTTGGA AATTATCATT AACCGGAATA AAAAGCCGGT TCAAAGACTA TTTAGTTCTT
TTTTCTGGCT TAACTTTTGC TAGTGCAATC TTCTACATGT TTATGACCTT AGCAACTAAT
CCTGCTTTCT TAAAGGGTTC ATTGAGTATT GCTTTTCAAA TAACTCAGGT TGTTTTCGGC
TTTGGAATTG CGCTCCTATC AATCATCACT TTTGTTTATA TTGTATATGC TAATAGCTTT
TTGCTAAGTA TGCGGCAGAA AGACTATGGA ATGTACATGA TGCTAGGTGC TAGAACTAGC
AAAATAGGAA GATTAATTTT TACTGAAACA CTTGTTGTTG GCTTATTAGC TACTTTATTA
GGAACAGTTC TAGGGGTTGC TTTAACGCAA GGTGTTTCTA GCATTTTGAT CTCACAATTG
GGCTTGCAAA TTCATAAGTT TGTAGGATTC TATTTGCCAG CATTACTTTG GACAATCGCA
TTTTTTGCAA TTTTATTCTT CTTAGCTGCT TTTTGGAATC GTCACAAGTT AGTTAAATCA
AACGTAATTA ACTTGCTTCA TGAAGATCAA AAACCAGTTA AATTACATAG AAATAAATTA
TGGAAGTTTG TTGAGGCACT TTTAGGTATT GCATTACTTG CTGTAGGTTA TTGGGCAATG
ATGCATGCAG CAAAATTAGG CACTAAAACT ATTCCAATTG CTTTCTTTAC AATCGTTTTT
GGTTCTTACT TTACTTTTGA TTCCTTCTTT ACAGCAATTA TTGATTTGCT TCGTAAGAAC
TTGTCTTTCA AATACAGAAA ACTTCATTCC TTTACTTTAG GTCAACTTAA GTTTAGATTA
AGTGACTATA CTAGAATTTT ATCAACCGTT TCATTACTAT TTGCGCTTGC TTTGGGAGCA
ATTACTGTTG GTTTGAACTT CAACAATATG ACTGAGCAGG CAATGCAAAG TACGTATTAT
GATGTAGTTT TATACAACCG TAATCCCAAG GTTGATAATC AACTAAAGAA AGTTTCTGTA
AAATCTACGA CTCATTTTGA CTATAAGATG GTCGTAGAGG GTAAGGGAAA AGAAAAGAAT
CGCGTCCTCT ATATTTCTGA AAATCAAATC AAGAATAATA AGATTATGTA TCAGCACTAT
TCACGTAAGA ATGACGTGAA CCACTATGAT ACTAAACGTC TTACTGTCAA TGATTTTAAA
AATAAGAAAT CAGATGCCGC AGCAGAAGGC GAATATCAAT TAGTGTCTCT TACTCCGTAT
GTTGACGCTC AAGCTGAGGT TGTATCGCAA GCTAAATATG ATCAAATTAA GGCCAAGGTA
AATAAGATTG AGCTTTTAAG AGTTAATAAC TTTAGAAGTA ATTTCAACAA TATTGAAAAG
TTACAAAAGT TATCGGTAAA TCAAATGATC AGTTCACCAG AAGCTGAAAA GGGAGCAATT
AATGTAAACC TTTCTAATTC AAAATCTGCT CAATATCGTT TAGTTTCAAG TATGACTTCT
GGTTTTGAAT TTATGGGCTT CTTCTTAGGA CTTGCCTTCC TAGCAATGCT TGCTTCAACC
TTGATGTTTA AAGTTTTATC TGGTGCAAAC AGCGACAAGC CAAGATACCA AATGCTTTGG
AAAGTTGGTA CAAGAAAGAG CTTATTGAAA GCATCAATTG CTAAAGAAAT TGGAATTCTA
TTTGTTTTAC CAGCGGTTTT AGGTGTGGTG GATGTTTTAT TTGGACTCCA ATTATTTAAA
TCTATCTTAG GAATGAATAC ATACGATAAA CTTTGGATTC CATTTACAAT TTTCGGCGTG
CTTTACGCAA TTTACTACCT ATTAACAGTG GCTTTATACC AACACATTGT TTTACAAAAA
GAAGATTAA
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| Protein sequence | MLWKLSLTGI KSRFKDYLVL FSGLTFASAI FYMFMTLATN PAFLKGSLSI AFQITQVVFG
FGIALLSIIT FVYIVYANSF LLSMRQKDYG MYMMLGARTS KIGRLIFTET LVVGLLATLL
GTVLGVALTQ GVSSILISQL GLQIHKFVGF YLPALLWTIA FFAILFFLAA FWNRHKLVKS
NVINLLHEDQ KPVKLHRNKL WKFVEALLGI ALLAVGYWAM MHAAKLGTKT IPIAFFTIVF
GSYFTFDSFF TAIIDLLRKN LSFKYRKLHS FTLGQLKFRL SDYTRILSTV SLLFALALGA
ITVGLNFNNM TEQAMQSTYY DVVLYNRNPK VDNQLKKVSV KSTTHFDYKM VVEGKGKEKN
RVLYISENQI KNNKIMYQHY SRKNDVNHYD TKRLTVNDFK NKKSDAAAEG EYQLVSLTPY
VDAQAEVVSQ AKYDQIKAKV NKIELLRVNN FRSNFNNIEK LQKLSVNQMI SSPEAEKGAI
NVNLSNSKSA QYRLVSSMTS GFEFMGFFLG LAFLAMLAST LMFKVLSGAN SDKPRYQMLW
KVGTRKSLLK ASIAKEIGIL FVLPAVLGVV DVLFGLQLFK SILGMNTYDK LWIPFTIFGV
LYAIYYLLTV ALYQHIVLQK ED
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