| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1680 |
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| Symbol | |
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| ID | 4439791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1660517 |
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| End bp | 1662811 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673500 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_815408 |
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| Protein GI | 116630236 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.119697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.00309861 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGTAAAAG AAACTGAACA ACGAAAAGAA CAAAAACATT TAGATGAAGT TCTAGGCTTA
ATTAAAAAGA AAGAAAGCGA GTTAGATCAT TCAATTGAAC ATGCGCAAAA TGAAGCGCAA
AATATTAATT CGCACTTTTT TGATGATGTA AAACTAGATT ATGATGGCTA TTCAACTTCA
ATGGATACTG CCTTGTCCAT TCACCAGCAA CAACAAATGC TAGCAGAACG TCAAAATGCC
TGGCAACATT CTGCTAAGCA ATTATCAACT TTGCAGCGGC TAGAGAAGAG ACCGTACTTT
GCTAGAGTTG ATTTCCAAGA ACCTAATGAA GATCCTGAAA CAATTTATAT TGGCTTAGGG
TCTTTTGCAG ATAAAGAAGA TCACTTTTTG ATTTATGATT GGCGTGCACC GATATCTTCT
ATTTATTATG ATGGCAAATT AGGTAAAGTT TCTTATAATG CCCCTGATGG TGTACAAACC
GTTGATATGA CTAAGAAGCG ACAATTCTTA ATTGAAGATG GTAAGATTAC TAATATGTTT
GATACCAATG AATCAATTGG GGATCAAATG CTTTTAAACG TCTTAAATGA AAAATCTTCT
ACACAGATGA AGTCGATCGT AACAACGATT CAGCGCGAGC AAAATAAGAT TATTAGAAAT
ACTAGTGCAG ACCTTTTATT TGTTCAAGGG GCAGCTGGAT CGGGTAAGAC TTCAGCTATT
ATGCAACGTG TTGCGTACCT GCTTTACCGT TATCGCGGCA ATCTAACTTC TAGCGATGTT
ATTATGTTTA GCCCTAATCA ATTGTTCAAC GATTATGTTA AAAATGTTCT ACCTGAAATG
GGTGAGCAAA ATATGGTGCA AATGACTTAC TGGCAATTTG TTTCGCGCCG TGTTCCAGGG
ATGAATGTTG AAAATTTATT CGAACAATTC GAAGATAATG AACAAAATGA CAAGATCGTT
AACTTAAAAG ATTCATTGCA ATTCTTTAAT GCGGTAACTC GCTATGCTAA GCACCTTGAA
AAGAATGGTT TAATCTTTAA AAATATTTAT TTCAAGAATA AGAAGAGACC ATTTTTCGAT
AAGGAAAAGA TCAAGGAAAT TTACTATGGC TTCAACGAAA ATTACCATTT AAGAAATAGA
ATTGAAGCTA CAAAAGAAAG TTTAATTAAT AGCTTAAATA GAAGAATTGA GCCAGAAACG
AAGAAGGCCT GGGTTGATAA GACGATTGAA TCGTTAGATC AAGAACAATT GAATAAGTTA
TATGATCGTC CAGACCAAGA ATTTGAATCA AGTGCTAAAG AAGAACATTT CTTAGCTCGT
AAAATTGTAA TTAAGCAATT AAAGCAAGTT AGCCGTAAGA TTCACCAGAA CCGTTTCTTA
AATATTCGGG CACAATACTT GCGCTTCTTG CGTGCTGTTC CGAAGTTGAT TGACTTAAGT
AAGTGGGATA TCAGCCAGGA AGAGTGGGAA GCACATATTG AAAATGTTAA GGATAGATTC
AGAAATGGCA AGATTAAGAT GGCTGACATT TCACCATACT TGTACTTGTA TGATTTAGTA
ACAGGCCGTA GAACTGATTA TGAAATGCGT TATGCCTTTA TTGATGAAAT TCAGGATTAT
ACGCCATTCC AGTTAGCTTA CCTTAAGTAC AACTTCCCAA GAGCTAAGTT TACGATGCTG
GGAGATTTAA ACCAGGCTAT CTTTACTAAA GATGAAAGCA AGACACTTTT AAGTCAGATT
TCTAAGTTGT TTGATCCAGA AAAGACTGAT GTTGTTCAAT TAACCAAGTC TTATCGGTCA
ACTAAGGAAT TGACAAACTT TACTAAGCAA ATTTTGCGGC AAGGTGAAAA GATTGAAGCC
TTTGACAGAC GTGGTCCTAA ACCTGCTTTT TATAAACGTG ATAGTCTTGA AAAAGAATTT
AATGCTTTAG AAGATATCTT AGTAGAAAAT GATGAGCAAA AGTTAACGAC TGCGATCATT
ACTAAGACTT TGGCTGAAGC GCAAGAAGTA GCTAAGGTTT TGAAAGAAAG AAAAATTAAG
GCAACTTTGA TTGGATCAGC TAACCAGCGT TTAGTACCTG GAACTTTAGT TATGCCATCA
TATTTAGCTA AAGGACTTGA ATTTGATGCA GTAATTGCTT GGAATGTTTC AAGGGATAAT
TATCACCAAC TTGATGAAAC GCAATTACTT TACACGATTA CTTCACGTGC AATGTATAAA
CTTGACTTGA TCTATACAGG CGAGAAGAGT CCACTGTTTG ATGATTTAGA CGAGAAAACT
TATGTGAATA AATAA
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| Protein sequence | MVKETEQRKE QKHLDEVLGL IKKKESELDH SIEHAQNEAQ NINSHFFDDV KLDYDGYSTS
MDTALSIHQQ QQMLAERQNA WQHSAKQLST LQRLEKRPYF ARVDFQEPNE DPETIYIGLG
SFADKEDHFL IYDWRAPISS IYYDGKLGKV SYNAPDGVQT VDMTKKRQFL IEDGKITNMF
DTNESIGDQM LLNVLNEKSS TQMKSIVTTI QREQNKIIRN TSADLLFVQG AAGSGKTSAI
MQRVAYLLYR YRGNLTSSDV IMFSPNQLFN DYVKNVLPEM GEQNMVQMTY WQFVSRRVPG
MNVENLFEQF EDNEQNDKIV NLKDSLQFFN AVTRYAKHLE KNGLIFKNIY FKNKKRPFFD
KEKIKEIYYG FNENYHLRNR IEATKESLIN SLNRRIEPET KKAWVDKTIE SLDQEQLNKL
YDRPDQEFES SAKEEHFLAR KIVIKQLKQV SRKIHQNRFL NIRAQYLRFL RAVPKLIDLS
KWDISQEEWE AHIENVKDRF RNGKIKMADI SPYLYLYDLV TGRRTDYEMR YAFIDEIQDY
TPFQLAYLKY NFPRAKFTML GDLNQAIFTK DESKTLLSQI SKLFDPEKTD VVQLTKSYRS
TKELTNFTKQ ILRQGEKIEA FDRRGPKPAF YKRDSLEKEF NALEDILVEN DEQKLTTAII
TKTLAEAQEV AKVLKERKIK ATLIGSANQR LVPGTLVMPS YLAKGLEFDA VIAWNVSRDN
YHQLDETQLL YTITSRAMYK LDLIYTGEKS PLFDDLDEKT YVNK
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