Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1648 |
Symbol | |
ID | 4439123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1610498 |
End bp | 1611040 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673472 |
Product | Sir2 family NAD-dependent protein deacetylase |
Protein accession | YP_815380 |
Protein GI | 116630208 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000000014463 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAT TAAAAGAACT CTTAAATGGA AAGAACTATT TTATTGCGAC TAGTGCTTTT GGTCACTTTT TTGAAAAAGC GGGTTTTGAA CAAGATAAAA TTTTTGATGT TTTTGGCGAT TGGACTAGAA TGCAATGTTC TAGTGGACTA AACCATGGTA CTTACTCTGA TTTGTCTGTT GTAAAAAGAT ATCTTAATGG ACAAGGTGAG ATTCCGCGCT GTGAAGATTG TGATTCGCCA ATGGAAATTC ATATGCCACT TAATGCGCAT TTCTTTCCAG ATGAAGATGC TAATACTAGA TTTCGCTGGT TTTTAACTAG AAATCAAACT AAGAAAGTTG TGGTTTTAGA ATTAGGGGTT GATCCAACCA GTCCACAATT GCTTGATCCA ATGATAAAAT TAGTAGAACA GTTTAAAGAT TGGCATTATA TTGCAGCTGA TTTAAGTCAG GATGATTTAC CTGATGATAT TCAAAAAAGA AGTGCCGGTT TAGGGATGGC ACTTCCTGAA GTGGTTGAAA AAATTTCTAA AAATGAAGGT TAA
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Protein sequence | MKQLKELLNG KNYFIATSAF GHFFEKAGFE QDKIFDVFGD WTRMQCSSGL NHGTYSDLSV VKRYLNGQGE IPRCEDCDSP MEIHMPLNAH FFPDEDANTR FRWFLTRNQT KKVVVLELGV DPTSPQLLDP MIKLVEQFKD WHYIAADLSQ DDLPDDIQKR SAGLGMALPE VVEKISKNEG
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