Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1640 |
Symbol | |
ID | 4439150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1602003 |
End bp | 1602833 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639673465 |
Product | ABC-type maltose transport system, permease component |
Protein accession | YP_815373 |
Protein GI | 116630201 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000193364 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCAGA AGAAATTACG TTGGGGAATG ATTTTTGTCT ATTTATTCAT TGGAATTTTT GGCATTATAA CTGTTTTCCC ATTTATTTAT ATGATTTTAG GTGGCTTGAT GTCATATCAA GAAACCACGA CTATTCCGCC AACTTTGATT CCTAAGGTTT TTAGGTGGAG TAACTATCAA AAAGTATTCG AACAAGCACC ATTTGCAAGA TACTTTTTGA ATACCTTTAT CACAGCAGCA ACAACCACAA TTGTTACTCT ATTTACTTCA ATCCTTGGTG CCTTTGCAAT GACTAATTTA AAGTTTAAGG GAAAAGGATT AATCCAATTG ATCTTTCTTT CATTGTTAAT GGTACCTGGA GAGGCAATAA TTTTTACTAA CTATAATACA ATTGCTCACT TAGGCTTATT GAATACGTAT TTAGGATTAG TTTTGCCATT TTTAACTTCA ATCTTCTATA TGTACTATTT ACAAAGCTAC TTCACAGCAA TTTCACCGAC AATTTATAAA GCAGCTATGA TCGATGGTGC TTCTGATTGG GAATATATTT GGAGAATTTT AGTTCCAATG TCTAAAGGTG GTTTAATTAC TGTAGCTTTA CTTAGTTTTA TTTCTGGCTG GAATTCATTC TTATGGCCAT TACTGGTTAC AAATGAAGAT AAAATGCGTT TATTAAACAA TGGGTTAGCT GCATTTGCGT CAGATGCAGG AGCTCAAACG CAATTACAAT TAGCAGCAGC AACTTTAACA GTTGTTCCTG TTTTAATTGT TTACTTCATT TTTAGAAAGC AAATTATTCG AGGAGTAGTA CGTAATGACC TCAAAGCCTA A
|
Protein sequence | MKQKKLRWGM IFVYLFIGIF GIITVFPFIY MILGGLMSYQ ETTTIPPTLI PKVFRWSNYQ KVFEQAPFAR YFLNTFITAA TTTIVTLFTS ILGAFAMTNL KFKGKGLIQL IFLSLLMVPG EAIIFTNYNT IAHLGLLNTY LGLVLPFLTS IFYMYYLQSY FTAISPTIYK AAMIDGASDW EYIWRILVPM SKGGLITVAL LSFISGWNSF LWPLLVTNED KMRLLNNGLA AFASDAGAQT QLQLAAATLT VVPVLIVYFI FRKQIIRGVV RNDLKA
|
| |