Gene LGAS_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1553 
Symbol 
ID4439247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1540693 
End bp1541550 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content36% 
IMG OID639673380 
Productaldo/keto reductase 
Protein accessionYP_815341 
Protein GI116630169 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones101 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTC ATTCAATCGA AGATACATAT ACATTAAATA ATGGTGTAGA AATTCCAATT 
ATTGGATTTG GAACTTGGCA AACACCCGAT GGAGATATTG CAAAGCATGC AGTTGAAGTA
GCACTTAATG CAGGCTATCG GCATATTGAT ACAGCAGCAG CTTATGGCAA TGAAAAAAGC
GTTGGTCAAG CAATAAAAAA GAGCGGAATA AATCGCCATG ACTTATTTAT TACAACTAAG
CTTTGGAATG CAGATCATGG CTATCAGTCA ACTAAAGCGG CAATTGATAG AAGTTTGCAA
AATTTAAAGG TTGATTATTT AGACTTGTAC CTAATTCATT GGCCTAATCC CGTTGCCATG
CGCGATCACT GGGCTGAAGC AAATGCTGAA AGCTGGCGAG CAATGGAAGA AGCCGTACAA
GCTGGAAAAA TTAGGGCAAT TGGAGTTTCT AATTTTAGAA AACGTCATTT GGATGAACTT
CTTAAAACAG CTGAAATAAA GCCTGTGGTT AATCAAATCA TGCTTAATCC AAGCGATTTA
CAATCAGATG TAGTTAAGGT TAATAATAAA CTGGGATTAC TTAGTGAAGC ATATAGTCCT
TTAGGTACTG GTGGATTATT AGGTAATGAA ACTGTTAAGG AAATAGCTAG TGAAGTAGGA
AAATCTCCAG CTCAAGTTTT AATTCGCTGG TCTTTAGAAC ATGGATTTTT ACCACTGCCT
AAATCAGTTC ATGATAAGTA TATTCAAGCT AATGTTGAAG TGTTTGATTT TAACTTGAAT
TCTGAACAGA TGAATAAATT AGATAGTTTA CATGGAGTTA GTGGATTAGC TACTGATCCA
GATACAGCTA ACTTTTAA
 
Protein sequence
MNFHSIEDTY TLNNGVEIPI IGFGTWQTPD GDIAKHAVEV ALNAGYRHID TAAAYGNEKS 
VGQAIKKSGI NRHDLFITTK LWNADHGYQS TKAAIDRSLQ NLKVDYLDLY LIHWPNPVAM
RDHWAEANAE SWRAMEEAVQ AGKIRAIGVS NFRKRHLDEL LKTAEIKPVV NQIMLNPSDL
QSDVVKVNNK LGLLSEAYSP LGTGGLLGNE TVKEIASEVG KSPAQVLIRW SLEHGFLPLP
KSVHDKYIQA NVEVFDFNLN SEQMNKLDSL HGVSGLATDP DTANF