Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1548 |
Symbol | |
ID | 4439242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1537594 |
End bp | 1538316 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639673375 |
Product | hypothetical protein |
Protein accession | YP_815337 |
Protein GI | 116630165 |
COG category | [S] Function unknown |
COG ID | [COG4905] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000391907 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTTA CTTTTTCTGA AGTTGTTGTG CTATTTTTTA CATATTCTGT AATTGGCTGG ATTTGGGAAA CTATATATTG TTCAATTAAA GATCATCATT ATGATTATCG AGGTTTTCTA TTTGGACCAT ACTGTCCCGT ATATGGCTTT GCTGTAACAA CAATTTTAAT CTGTACGTAT CGAATTCAAA ATAACCTTTT TCTTCTATAT ATAGTAGGAG TAATTGTAGC TACTATTTTT GAATATTGTG CTAGCGTGTT CTTACAGTAT GTGTTTCATA TGAAGTTATG GGACTATTCG CACCTATGGG GAAATATTCA AGGAAGGGTC GCACCAATCA TCTCTTTATT TTGGGGATTA GGGGTTGTTT TCTTAGTAAA AATAGTTCAA CCCTTCATTC AGAAAATTAT TAATTGGGAA GAAGCAAAAA CACATGGTTA TTTAGCCTTA ATGATACTTT TAGTCATGGG AACTGATTTT ATTCTCACTA TTATCAGTGT AGAGAAACTT CATCTTAGTA CTAAACATTG GGATGAACGG TTAAATGCAC AGCTAAAGGT AGATGAGAAC AAGCTTAATG ATCGTTTTGA TAAACTACTA GAATCATTTT CATGGAATCA AAAAAGGTTG TTAACTAGCT TTCCTCATCT TAAATTTACA GATGCAAGGC ACTTTAATGA AGCTAAACGT AGACTAATAA GCAGAAGAGA AAATAGGAGC TAG
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Protein sequence | MPFTFSEVVV LFFTYSVIGW IWETIYCSIK DHHYDYRGFL FGPYCPVYGF AVTTILICTY RIQNNLFLLY IVGVIVATIF EYCASVFLQY VFHMKLWDYS HLWGNIQGRV APIISLFWGL GVVFLVKIVQ PFIQKIINWE EAKTHGYLAL MILLVMGTDF ILTIISVEKL HLSTKHWDER LNAQLKVDEN KLNDRFDKLL ESFSWNQKRL LTSFPHLKFT DARHFNEAKR RLISRRENRS
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