Gene LGAS_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1548 
Symbol 
ID4439242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1537594 
End bp1538316 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content33% 
IMG OID639673375 
Producthypothetical protein 
Protein accessionYP_815337 
Protein GI116630165 
COG category[S] Function unknown 
COG ID[COG4905] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000391907 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTTA CTTTTTCTGA AGTTGTTGTG CTATTTTTTA CATATTCTGT AATTGGCTGG 
ATTTGGGAAA CTATATATTG TTCAATTAAA GATCATCATT ATGATTATCG AGGTTTTCTA
TTTGGACCAT ACTGTCCCGT ATATGGCTTT GCTGTAACAA CAATTTTAAT CTGTACGTAT
CGAATTCAAA ATAACCTTTT TCTTCTATAT ATAGTAGGAG TAATTGTAGC TACTATTTTT
GAATATTGTG CTAGCGTGTT CTTACAGTAT GTGTTTCATA TGAAGTTATG GGACTATTCG
CACCTATGGG GAAATATTCA AGGAAGGGTC GCACCAATCA TCTCTTTATT TTGGGGATTA
GGGGTTGTTT TCTTAGTAAA AATAGTTCAA CCCTTCATTC AGAAAATTAT TAATTGGGAA
GAAGCAAAAA CACATGGTTA TTTAGCCTTA ATGATACTTT TAGTCATGGG AACTGATTTT
ATTCTCACTA TTATCAGTGT AGAGAAACTT CATCTTAGTA CTAAACATTG GGATGAACGG
TTAAATGCAC AGCTAAAGGT AGATGAGAAC AAGCTTAATG ATCGTTTTGA TAAACTACTA
GAATCATTTT CATGGAATCA AAAAAGGTTG TTAACTAGCT TTCCTCATCT TAAATTTACA
GATGCAAGGC ACTTTAATGA AGCTAAACGT AGACTAATAA GCAGAAGAGA AAATAGGAGC
TAG
 
Protein sequence
MPFTFSEVVV LFFTYSVIGW IWETIYCSIK DHHYDYRGFL FGPYCPVYGF AVTTILICTY 
RIQNNLFLLY IVGVIVATIF EYCASVFLQY VFHMKLWDYS HLWGNIQGRV APIISLFWGL
GVVFLVKIVQ PFIQKIINWE EAKTHGYLAL MILLVMGTDF ILTIISVEKL HLSTKHWDER
LNAQLKVDEN KLNDRFDKLL ESFSWNQKRL LTSFPHLKFT DARHFNEAKR RLISRRENRS