Gene LGAS_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1544 
Symbol 
ID4439269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1534803 
End bp1535123 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content36% 
IMG OID639673371 
Producthypothetical protein 
Protein accessionYP_815334 
Protein GI116630162 
COG category[S] Function unknown 
COG ID[COG4269] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000142807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA GACATGGTCG TAATTCATTT TTTGATGGTG GGCTGCTATC TTTCATTGGC 
TGGCACCTAT TAGGAACAAT TATTACAGTT TGTACTTTCG GTATTTGTTA TCCTTGGGCG
GTGTGCATGA TTTATGGATG GGAGATCAAT CATACTGTAA TCGAAGGACA TCGGATGAAA
TTTATCGGAA GTGCATTTGG TTTATTTGGC AATTGGATAA AGTGGCTTCT GTTAACGATT
ATTACTCTTG GTATTTATGG CTTTTGGGTT GGAATAAAGA TTAGAGACTG GAAAGCTAAA
AATACAATTT TCATTAGTTA A
 
Protein sequence
METRHGRNSF FDGGLLSFIG WHLLGTIITV CTFGICYPWA VCMIYGWEIN HTVIEGHRMK 
FIGSAFGLFG NWIKWLLLTI ITLGIYGFWV GIKIRDWKAK NTIFIS