Gene LGAS_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_1533 
Symbol 
ID4439258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp1528334 
End bp1528684 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content34% 
IMG OID639673360 
Productcytidylyltransferase 
Protein accessionYP_815325 
Protein GI116630153 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0615] Cytidylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR01518] glycerol-3-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.000327632 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.335792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATTACG GTCATATCCG TCTTCTAAAA AGAGCGCGTG CATTAGGAGA CTACCTAATA 
GTTGGACTAT CAACAGACGA ATTTAATGAG TTTAGCAAGC ACAAGCAAGC ATACAATAAT
TATGCCGAAA GAAAATATAT TCTTGAAGCA ATTCGATATG TTGACCAAGT TATTCCTGAA
GAAAATTGGG ATCAAAAAAT CAGCGATGTC CAAAAGTATG ATATTGATAC TTTCGTAATG
GGGAATGATT GGGAAGGAAA ATTTGACTTT CTAAAGCCCT ACTGTAAAGT AAAATATCTT
GAAAGAACAC CTGGAATTTC TACTACCCAA ATCAAAGAAG ACTTAAAGTA A
 
Protein sequence
MHYGHIRLLK RARALGDYLI VGLSTDEFNE FSKHKQAYNN YAERKYILEA IRYVDQVIPE 
ENWDQKISDV QKYDIDTFVM GNDWEGKFDF LKPYCKVKYL ERTPGISTTQ IKEDLK