Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1530 |
Symbol | |
ID | 4439286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1526306 |
End bp | 1527406 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639673357 |
Product | glycosyltransferase |
Protein accession | YP_815322 |
Protein GI | 116630150 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000442427 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.18466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTTT TACATATTAA TGCCGGACTG GAAAAGGGCG GTGGCCTATT TCATATTGTT AATTTATTAA CAGAAGCTAA TCAAGAAGAT GCTGATTTTG AACTGTTGAC CTTAGCAGAT GGTCCGGTGG CCAAAGCTGC TAAAAAAGCA GGCATTAAGA CAACGATTCT AGGTGCCCAA AGTCGTTATG ATTTAACTGT TTTAAAAAGA CTCGCTAAAT TCATTAATAA TGGCAACTTT GATATCGTTC ATACTCATGG TGCGCGAGCT AATTTATTTG TTTCGATGAT TAAGAAGCAA ATTAAGGCCA AGTGGATTAT CACAGTTCAC TCTGATCCTT TAAAAGATTT TGAAGGACGC GGAATGGTTG GAAATATTTT TACTAAGCTA AATATTATGG CCTTAAAAAA GGCTGATGGT ATTTTTGCGA TTACGCAGAA TTTTTCTGAC CTTTTAGTTG AAAAGGTAGG CATCCCGAAA ACTAAAATTT GTGTAATCTA TAATGGGATC TTTTTCCATG ACAATAAAGA ATTACCTAAA AAATATGCTC ATCCTTATTT CAATATAATT AATGTTGGAA GGACGGAAAA AGTTAAGGGG CAAGATTTAC TTTTAAAAGC TATTAAAAAG ATTGATGATA AAAATGTTCG CTTACATATT GCTGGTGATG GAAGCGAATT TAATAATTTA AGAGCACTTG CCCGAGATTT AGGAATTAGT TCGCAGGTAA CTTTTCATGG CTTTTTGAAC CAGAAAGAGA TTAGCAAACT ATATCAAAAA ATGGATCTGG CAGTTTTAAC ATCTTATTCA GAAAGTTTCC CTCTGGTACT ACTTGAAGCT AGCGATAATC TAGTGCCAAT TATGTCAACT GATGTAGGCG ACATTGAAAA GATGATTCCT AGTGAAAAAT ACGGATTTGT TGCTAAAATT GGAAATTTAG ATGATATCAG TGAAAAGCTA AAGCAAGCAA TTTCAAGTAG TCGAGAAGAT CTTGAAGAGA TGGCAAAAAA AGAAAAGCTG TATTTGATGC GTGCTTTTTC AATGAGGAAT CAGTTAGTGG CAATTGAAAA TTATTACAAA TTTATCTTGG GTGAAAAATA G
|
Protein sequence | MKVLHINAGL EKGGGLFHIV NLLTEANQED ADFELLTLAD GPVAKAAKKA GIKTTILGAQ SRYDLTVLKR LAKFINNGNF DIVHTHGARA NLFVSMIKKQ IKAKWIITVH SDPLKDFEGR GMVGNIFTKL NIMALKKADG IFAITQNFSD LLVEKVGIPK TKICVIYNGI FFHDNKELPK KYAHPYFNII NVGRTEKVKG QDLLLKAIKK IDDKNVRLHI AGDGSEFNNL RALARDLGIS SQVTFHGFLN QKEISKLYQK MDLAVLTSYS ESFPLVLLEA SDNLVPIMST DVGDIEKMIP SEKYGFVAKI GNLDDISEKL KQAISSSRED LEEMAKKEKL YLMRAFSMRN QLVAIENYYK FILGEK
|
| |